Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02165 and BSU12790

See Amino acid alignment / Visit BSNT_02165 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:40
# Commandline: needle
#    -asequence dna-align/BSNT_02165___xhlA.1.22522.seq
#    -bsequence dna-align/BSU12790___xhlA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02165___xhlA-BSU12790___xhlA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02165___xhlA-BSU12790___xhlA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02165___xhlA
# 2: BSU12790___xhlA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     265/270 (98.1%)
# Similarity:   265/270 (98.1%)
# Gaps:           0/270 ( 0.0%)
# Score: 1305.0
# 
#
#=======================================

BSNT_02165___      1 ATGCAGCAAGAGGCAGATGTGAATGTGTTTCAGCAAGATTTATTAGACAT     50
                     |||||||||||||||||.|||||||||||||||||.||||||..||||||
BSU12790___xh      1 ATGCAGCAAGAGGCAGACGTGAATGTGTTTCAGCAGGATTTAGCAGACAT     50

BSNT_02165___     51 GAAAGGCGAGCACAAAGCACTTGAGCAGAGGGTTTCTGCATTAGAACGCG    100
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU12790___xh     51 GAAAGGCGAGCACAAAGCACTTGAGCAGAGGGTTTCCGCATTAGAACGCG    100

BSNT_02165___    101 TGTCTGACCGGCAAGACCAGCAAATCATGACGCTGAACGAAAAATTAAAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12790___xh    101 TGTCTGACCGGCAAGACCAGCAAATCATGACGCTGAACGAAAAATTAAAC    150

BSNT_02165___    151 AAAATTGAAGAAAACACCACGTGGATTAAACGCACCATCACAGGTGCCAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12790___xh    151 AAAATTGAAGAAAACACCACGTGGATTAAACGCACCATCACAGGTGCCAT    200

BSNT_02165___    201 CATTACAGCAGTGTCTACAGGCATCATTGGCGGAGCCATCGCCATTATGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12790___xh    201 CATTACAGCAGTGTCTACAGGCATCATTGGCGGAGCCATCGCCATTATGT    250

BSNT_02165___    251 ACAGCCTGCTGCAGCATTAA    270
                     ||||||||||||||||||||
BSU12790___xh    251 ACAGCCTGCTGCAGCATTAA    270


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