Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02164 and BSU12780

See Amino acid alignment / Visit BSNT_02164 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:40
# Commandline: needle
#    -asequence dna-align/BSNT_02164___xepA.1.22522.seq
#    -bsequence dna-align/BSU12780___xepA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02164___xepA-BSU12780___xepA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02164___xepA-BSU12780___xepA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02164___xepA
# 2: BSU12780___xepA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 840
# Identity:     823/840 (98.0%)
# Similarity:   823/840 (98.0%)
# Gaps:           0/840 ( 0.0%)
# Score: 4047.0
# 
#
#=======================================

BSNT_02164___      1 ATGGTGAAGTATCAATATGAATTTCCTCTCGATAGGACTGGAAAAGCTGG     50
                     ||||||||||||||||||||||||||||||||||.|.||||||||||.||
BSU12780___xe      1 ATGGTGAAGTATCAATATGAATTTCCTCTCGATAAGGCTGGAAAAGCCGG     50

BSNT_02164___     51 CGCTGTAAAGCCCTATCGAGGAGGAAAAAATGATTTTGTGACACCTGTTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12780___xe     51 CGCTGTAAAGCCCTATCGAGGAGGAAAAAATGATTTTGTGACACCTGTTT    100

BSNT_02164___    101 CGAATTTGTCAGGCGTAGCGGAGATTTTAACAAATGCTTCCTTAAAGGCG    150
                     ||||||||||||||||||||||||||||||||||||||.|.|||||||||
BSU12780___xe    101 CGAATTTGTCAGGCGTAGCGGAGATTTTAACAAATGCTGCTTTAAAGGCG    150

BSNT_02164___    151 ACTGAGGCATATAGTCAACTCGGGCAGGACAGGCTTGGCGCAGTTCTGAT    200
                     |||||||||||.|||||.||||||||||||||||||||||||||||||||
BSU12780___xe    151 ACTGAGGCATACAGTCAGCTCGGGCAGGACAGGCTTGGCGCAGTTCTGAT    200

BSNT_02164___    201 TTCGAAAGTGAAGGGCTGGGCGTATGCAGATCGTGAAGGTACGCTCTTTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12780___xe    201 TTCGAAAGTGAAGGGCTGGGCGTATGCAGATCGTGAAGGTACGCTCTTTA    250

BSNT_02164___    251 TAGAAGAAAGCGACAACAACAATGTTTGGACAACGACAGCAGCAGTTAAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12780___xe    251 TAGAAGAAAGCGACAACAACAATGTTTGGACAACGACAGCAGCAGTTAAT    300

BSNT_02164___    301 GTCGCAGCAGGTGTCCTGACAGCGACGGACTGGGTATATCTTTCTAAACG    350
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU12780___xe    301 GTCGCAGCAGGCGTCCTGACAGCGACGGACTGGGTATATCTTTCTAAACG    350

BSNT_02164___    351 CTATTACCGCTTCCGCTATGTGAACGGGAATCTTCAGCAATCCGAGTTTG    400
                     |||||||||.||||||||||||||||||||||||||||||||.|||||||
BSU12780___xe    351 CTATTACCGTTTCCGCTATGTGAACGGGAATCTTCAGCAATCTGAGTTTG    400

BSNT_02164___    401 TATTATACCAATCGGTCGGTGCGGGTGAGATGGATGTGCGTGTCAATGGA    450
                     |||||||||||||.||||||||||||||||||||||||||||||||||.|
BSU12780___xe    401 TATTATACCAATCAGTCGGTGCGGGTGAGATGGATGTGCGTGTCAATGAA    450

BSNT_02164___    451 AAAACGCCTTTACAGATTGACTTTGCGGATAATCAAACACACGATGGACG    500
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU12780___xe    451 AAAACGCCTTTACAGATTGACTTTGCGGAGAATCAAACACACGATGGACG    500

BSNT_02164___    501 GCTGAAAGTCGAGGCTCGCAAAACATTTGACTTTGTCTTTCATGAAAATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12780___xe    501 GCTGAAAGTCGAGGCTCGCAAAACATTTGACTTTGTCTTTCATGAAAATG    550

BSNT_02164___    551 CAGAGTCCGCCGGCGAGGGGGCTGCCTTACCTGTTGACGGTGCCGCGCAT    600
                     |||||||||||.|||||||||||||.||||||||||||||||||||||||
BSU12780___xe    551 CAGAGTCCGCCAGCGAGGGGGCTGCTTTACCTGTTGACGGTGCCGCGCAT    600

BSNT_02164___    601 TTACTCGTTGAAGTCTACGGCACAGCAGAAATGAGCGAAGTCAAATTTTG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12780___xe    601 TTACTCGTTGAAGTCTACGGCACAGCAGAAATGAGCGAAGTCAAATTTTG    650

BSNT_02164___    651 GGGCAAATCGGTGTCAGGACAGAAACTGCCGATCAGAGGCGTGAAAACTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12780___xe    651 GGGCAAATCGGTGTCAGGACAGAAACTGCCGATCAGAGGCGTGAAAACTG    700

BSNT_02164___    701 ATGATGCTACCACTGCCTCCAGTACATTAGGAAAAGCCGAGGCATGGGCC    750
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU12780___xe    701 ATGATGCTACCACTGCCTCCAGTACATTAGGAAAAGCTGAGGCATGGGCC    750

BSNT_02164___    751 TTTGATATTAAAGGGTTTAAGGAGATTATCATGGAGATTATCAGTATCAC    800
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU12780___xe    751 TTTGATATTAAAGGGTTTAAGGAGATCATCATGGAGATTATCAGTATCAC    800

BSNT_02164___    801 CGGCGGTACTCTTTCGGTAAAAGGGACCGCGGTTTCATAA    840
                     ||||||||||||||||||||||||||||||||||||||||
BSU12780___xe    801 CGGCGGTACTCTTTCGGTAAAAGGGACCGCGGTTTCATAA    840


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