Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02161 and BSU12760

See Amino acid alignment / Visit BSNT_02161 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:39
# Commandline: needle
#    -asequence dna-align/BSNT_02161___xkdW.1.22522.seq
#    -bsequence dna-align/BSU12760___xkdW.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02161___xkdW-BSU12760___xkdW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02161___xkdW-BSU12760___xkdW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02161___xkdW
# 2: BSU12760___xkdW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 331
# Identity:     281/331 (84.9%)
# Similarity:   281/331 (84.9%)
# Gaps:           2/331 ( 0.6%)
# Score: 1193.0
# 
#
#=======================================

BSNT_02161___      1 ATGATATTATACGACGCAATCATGTACAAATACCCTGACGCTGTGCCAAG     50
                     |||||.|||||.||.||.||.||||||||.||.||..||||.||..|.||
BSU12760___xk      1 ATGATCTTATATGATGCCATTATGTACAAGTATCCAAACGCAGTATCGAG     50

BSNT_02161___     51 AAAGGATTTTGAGCTGCGCAATGACGGCAATGGTTCTTACATTGAAAAAT    100
                     ||||||||||||..||||.||||||||.||.|||||.||||||||.||||
BSU12760___xk     51 AAAGGATTTTGAATTGCGTAATGACGGGAACGGTTCATACATTGAGAAAT    100

BSNT_02161___    101 GGAACCTGCGCTCGCCCATCCCAACACAAAAAGAACTCGAAACTTGGTGG    150
                     ||||.||.||..||||..|.||.||.||...||||||||||||.||||||
BSU12760___xk    101 GGAATCTCCGGGCGCCGTTGCCGACTCAGGCAGAACTCGAAACCTGGTGG    150

BSNT_02161___    151 GAAGAGCTGCAAAAAAACCCGCCGTACGAGCCGCCTGATCAGGTGGAGCT    200
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU12760___xk    151 GAAGAGCTGCAAAAAAATCCGCCGTACGAGCCGCCTGATCAGGTGGAGCT    200

BSNT_02161___    201 TCTCGCTCAGGAGTTGTCGCAGGAAAAGCTGGCACGTAAGCAGCTTGAAG    250
                     |||||||||.||.|||||.|||||||||||||||||.|||||||||||||
BSU12760___xk    201 TCTCGCTCAAGAATTGTCACAGGAAAAGCTGGCACGCAAGCAGCTTGAAG    250

BSNT_02161___    251 AGCTGAACAAAAC-TTTGGGAAGCGAGCTGGCAGGTATTAAGCTTTCACT    299
                     ||||||||||||| ||.||||| ||||.||.|||.|||.|||||.|||.|
BSU12760___xk    251 AGCTGAACAAAACATTAGGGAA-CGAGTTGTCAGATATAAAGCTATCATT    299

BSNT_02161___    300 ACTTTCTTTGAAAGGAGATTACTCTGAATGA    330
                     ||||||.||||||||||||||..||||||||
BSU12760___xk    300 ACTTTCCTTGAAAGGAGATTATGCTGAATGA    330


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