Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02148 and BSU12672

See Amino acid alignment / Visit BSNT_02148 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:35
# Commandline: needle
#    -asequence dna-align/BSNT_02148.1.22522.seq
#    -bsequence dna-align/BSU12672___xkzB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02148-BSU12672___xkzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02148-BSU12672___xkzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02148
# 2: BSU12672___xkzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 162
# Identity:      99/162 (61.1%)
# Similarity:    99/162 (61.1%)
# Gaps:          33/162 (20.4%)
# Score: 326.5
# 
#
#=======================================

BSNT_02148         1 ------------ATGCACGAGCTTCACTATTCCCCATC---------AGA     29
                                 |||||.||||||||.||.||.|||||         .||
BSU12672___xk      1 TTGTACTATGCAATGCATGAGCTTCATTACTCGCCATCCCAACTTCTTGA     50

BSNT_02148        30 TTTATTGGCGCTCTACGAAGCGCCCAGAAACTATAAAGCGCTGTTGTATG     79
                     .|||         ||.|||||.||.|.|.|.|.||||||.||.||.|.||
BSU12672___xk     51 ATTA---------TATGAAGCACCAAAACATTTTAAAGCTCTTTTATTTG     91

BSNT_02148        80 GACTGATCGGATATAAGCTCGATCTCCTTGAAAAACAAGCAAAGAAAGGA    129
                     |..||||.||.||||||||.|||||..|.||||||.||.|||.||.||||
BSU12672___xk     92 GGTTGATAGGTTATAAGCTAGATCTATTAGAAAAAGAATCAAGGAGAGGA    141

BSNT_02148       130 GGGGCATCGTAA    141
                     |||  |.| |||
BSU12672___xk    142 GGG--AAC-TAA    150


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