Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02121 and BSU12539

See Amino acid alignment / Visit BSNT_02121 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:33
# Commandline: needle
#    -asequence dna-align/BSNT_02121.1.22522.seq
#    -bsequence dna-align/BSU12539___ykzK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02121-BSU12539___ykzK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02121-BSU12539___ykzK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02121
# 2: BSU12539___ykzK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     166/168 (98.8%)
# Similarity:   166/168 (98.8%)
# Gaps:           0/168 ( 0.0%)
# Score: 822.0
# 
#
#=======================================

BSNT_02121         1 ATGTGCAAGCTTTGTCAAACAAAGAAAGTCATTGTGGAACATACCGGTAT     50
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU12539___yk      1 ATGTGTAAGCTTTGTCAAACAAAGAAAGTCATTGTGGAACATACCGGTAT     50

BSNT_02121        51 TGGAGTCGTTTTTCATCCATGTCCGAACTGCCGGTCCGGCACTGACTTAA    100
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU12539___yk     51 TGGAGTTGTTTTTCATCCATGTCCGAACTGCCGGTCCGGCACTGACTTAA    100

BSNT_02121       101 CGCCTGTCATTCAAAAGCTGGAGCAAATGCTGACAGCGGGAAAAGCGAGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12539___yk    101 CGCCTGTCATTCAAAAGCTGGAGCAAATGCTGACAGCGGGAAAAGCGAGG    150

BSNT_02121       151 CTGAATATCTATGATTAA    168
                     ||||||||||||||||||
BSU12539___yk    151 CTGAATATCTATGATTAA    168


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