Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02118 and BSU12520

See Amino acid alignment / Visit BSNT_02118 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:33
# Commandline: needle
#    -asequence dna-align/BSNT_02118___xkdB.1.22522.seq
#    -bsequence dna-align/BSU12520___xkdB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02118___xkdB-BSU12520___xkdB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02118___xkdB-BSU12520___xkdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02118___xkdB
# 2: BSU12520___xkdB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 837
# Identity:     827/837 (98.8%)
# Similarity:   827/837 (98.8%)
# Gaps:           0/837 ( 0.0%)
# Score: 4095.0
# 
#
#=======================================

BSNT_02118___      1 ATGAAAAACGATAAAAGCTATCCTTTTCCGACGTATTCAGGGTTATTGAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU12520___xk      1 ATGAAAAACGATAAAAGCTATCCTTTTCCGACGTATTCAGGGTTGTTGAA     50

BSNT_02118___     51 TTCAGAACATTATGACAAAATGGGCCCGGCGCTATGGTTGTTTCTCTGGT    100
                     |||||||||||||||||||||.|||||||||.|||||.||||||||||||
BSU12520___xk     51 TTCAGAACATTATGACAAAATTGGCCCGGCGTTATGGCTGTTTCTCTGGT    100

BSNT_02118___    101 TTATCAGCTCAACAACAAAAGAAATCGAAAAAGACGGGGTAAGCTGGGGC    150
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU12520___xk    101 TTATCAGCTCAACAACAAAAGAAATCGAAAAAGACGGCGTAAGCTGGGGC    150

BSNT_02118___    151 ATCGTACTCGGCCATAAGCCGTTAAAAGCGAGAGAAATGGCGGCAGTCTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12520___xk    151 ATCGTACTCGGCCATAAGCCGTTAAAAGCGAGAGAAATGGCGGCAGTCTT    200

BSNT_02118___    201 CGGCGTAAGTGAAAAAACCGTCAGAAGATGGCTGGAGCTTCTCGAAAACC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12520___xk    201 CGGCGTAAGTGAAAAAACCGTCAGAAGATGGCTGGAGCTTCTCGAAAACC    250

BSNT_02118___    251 ATGATTACATAAAGGCCGTCCGTGCGCCATACGGACTGATGATTTCGGTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12520___xk    251 ATGATTACATAAAGGCCGTCCGTGCGCCATACGGACTGATGATTTCGGTC    300

BSNT_02118___    301 AAGCATTCCAAAAAATTCAGCTTCAGATCGGACAATACTGTACACGGGAG    350
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU12520___xk    301 AAGCATTCAAAAAAATTCAGCTTCAGATCGGACAATACTGTACACGGGAG    350

BSNT_02118___    351 TCTAAAAGAACGGCCATTTTCGCCGCAGACACCGGACACAAACGACCGTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12520___xk    351 TCTAAAAGAACGGCCATTTTCGCCGCAGACACCGGACACAAACGACCGTA    400

BSNT_02118___    401 CAGATATAGATAAAACAAACAAATATACTGCTGCTGATGATGCAGTGGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12520___xk    401 CAGATATAGATAAAACAAACAAATATACTGCTGCTGATGATGCAGTGGAT    450

BSNT_02118___    451 CACATTGCGAAGCGGTTTACACAATTACGGTCGGCTCAAGAAGGACGCAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12520___xk    451 CACATTGCGAAGCGGTTTACACAATTACGGTCGGCTCAAGAAGGACGCAC    500

BSNT_02118___    501 CGTGTATCCTTCCTCAAGAGATTATCAAGCCATCGCCCGCATTGTTGCCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12520___xk    501 CGTGTATCCTTCCTCAAGAGATTATCAAGCCATCGCCCGCATTGTTGCCA    550

BSNT_02118___    551 TCGGCGTTCCTGTCATGCAAACAATCAAATGGCTTGAAGAATGCTTTCAG    600
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU12520___xk    551 TCGGCGTTCCTGTCACGCAAACAATCAAATGGCTTGAAGAATGCTTTCAG    600

BSNT_02118___    601 ACTTTTGAAAACCGGCGGACCGCCGCTTCTGAAACAATCAAGGCTTTTCG    650
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU12520___xk    601 GCTTTTGAAAACCGGCGGACCGCCGCTTCTGAAACAATCAAGGCTTTTCG    650

BSNT_02118___    651 CTACTGCTCGAAATTCATTGAAGACAGATTTTTCGCGCAGCAAGCCAAAA    700
                     ||||||||||||||||||||||||..||||||||||||||||||||||||
BSU12520___xk    651 CTACTGCTCGAAATTCATTGAAGATCGATTTTTCGCGCAGCAAGCCAAAA    700

BSNT_02118___    701 AGAATGCCGCAATTCAGCATGAGAGGATGAAAAAACATGACAAAACGAAC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12520___xk    701 AGAATGCCGCAATTCAGCATGAGAGGATGAAAAAACATGACAAAACGAAC    750

BSNT_02118___    751 AATCGAACAGATTTTGGACGAGCTGAGAAGAGGGAGACGTCCATTACTGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12520___xk    751 AATCGAACAGATTTTGGACGAGCTGAGAAGAGGGAGACGTCCATTACTGG    800

BSNT_02118___    801 CGGACAAACCGGCCGAATCAGACGCAAGCAGGTATGA    837
                     |||||||||||||||||||||||||||||||||||||
BSU12520___xk    801 CGGACAAACCGGCCGAATCAGACGCAAGCAGGTATGA    837


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