Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02117 and BSU12519

See Amino acid alignment / Visit BSNT_02117 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:32
# Commandline: needle
#    -asequence dna-align/BSNT_02117.1.22522.seq
#    -bsequence dna-align/BSU12519___yjzJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02117-BSU12519___yjzJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02117-BSU12519___yjzJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02117
# 2: BSU12519___yjzJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity:     173/180 (96.1%)
# Similarity:   173/180 (96.1%)
# Gaps:           0/180 ( 0.0%)
# Score: 837.0
# 
#
#=======================================

BSNT_02117         1 ATGTATCCAATCCAAATTGTTTTTAGTGAAAATCCCATAGATCAGCGCCA     50
                     ||||||||.||||||||.||||||||||||||||||||||||||||||||
BSU12519___yj      1 ATGTATCCGATCCAAATCGTTTTTAGTGAAAATCCCATAGATCAGCGCCA     50

BSNT_02117        51 TCTCGGACAATCCGGCGGCACCATTTCGTTTACGGCATGCGGCCTTCCGG    100
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU12519___yj     51 TCTCGGACAATCCGGCGGCACCATTTCGTTTACCGCATGCGGCCTTCCGG    100

BSNT_02117       101 TGTTCCACTTTGAAACGCAAGAGCAGTTTCAAGCATACATGATGTTAAAG    150
                     ||||.||||||||||||||.||.||||||||||||||||||||||||||.
BSU12519___yj    101 TGTTTCACTTTGAAACGCAGGAACAGTTTCAAGCATACATGATGTTAAAA    150

BSNT_02117       151 GGAGAAGCGGCGTACAATGAAAAACGATAA    180
                     ||||||||||||||||||||||||||||||
BSU12519___yj    151 GGAGAAGCGGCGTACAATGAAAAACGATAA    180


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.