Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02113 and BSU12480

See Amino acid alignment / Visit BSNT_02113 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:32
# Commandline: needle
#    -asequence dna-align/BSNT_02113___yjqB.1.22522.seq
#    -bsequence dna-align/BSU12480___yjqB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02113___yjqB-BSU12480___yjqB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02113___yjqB-BSU12480___yjqB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02113___yjqB
# 2: BSU12480___yjqB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 603
# Identity:     578/603 (95.9%)
# Similarity:   578/603 (95.9%)
# Gaps:           0/603 ( 0.0%)
# Score: 2790.0
# 
#
#=======================================

BSNT_02113___      1 ATGAAAGATATGTATGACAGCTTTGCAGCCCTTTCTGCTTCTGAGTCGGA     50
                     |||.||||||||||||||||||||||.|||||||||||||||||||||||
BSU12480___yj      1 ATGGAAGATATGTATGACAGCTTTGCGGCCCTTTCTGCTTCTGAGTCGGA     50

BSNT_02113___     51 GTACCGGATTATTTATGAGGAGAAAAACGGAAGTGAGCTTATCGTCCTCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12480___yj     51 GTACCGGATTATTTATGAGGAGAAAAACGGAAGTGAGCTTATCGTCCTCG    100

BSNT_02113___    101 GTCCCCACGGCGGCAGAATTGAGCCTGGCGTCAGTGAATTGGTGCGGGCA    150
                     ||||.|||||||||||||||||||||||||||||||||.|||||||||||
BSU12480___yj    101 GTCCTCACGGCGGCAGAATTGAGCCTGGCGTCAGTGAACTGGTGCGGGCA    150

BSNT_02113___    151 TTTTCGGATCGATGCTCCATCTATTTGTTTGAGGGTGTAAAACAGCGAAA    200
                     ||||||||||||||.|||||||||||||||||||||.||||.||||||||
BSU12480___yj    151 TTTTCGGATCGATGTTCCATCTATTTGTTTGAGGGTCTAAAGCAGCGAAA    200

BSNT_02113___    201 CAATCGTTCCTTGCATCTCACCAGCATTCGTTTTGATGAGCCGCTGGCTT    250
                     |||.|||||||||||||||||.||||||||||||||||||||||||||||
BSU12480___yj    201 CAACCGTTCCTTGCATCTCACTAGCATTCGTTTTGATGAGCCGCTGGCTT    250

BSNT_02113___    251 TAGAAAAAGTGAATGCCCACCATTACGCATTAGCGTTTCACGGGTATTAT    300
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU12480___yj    251 TAGAAAAAGTGAATGACCACCATTACGCATTAGCGTTTCACGGGTATTAT    300

BSNT_02113___    301 GATCCAAACATCCCGCATACTTTGGTCGGCGGGGCTGATCGAAAAAAAGC    350
                     |||||.||.|||||||||||.||||||||||||||.|||||.||||||||
BSU12480___yj    301 GATCCGAAAATCCCGCATACATTGGTCGGCGGGGCGGATCGTAAAAAAGC    350

BSNT_02113___    351 CAAGCTCATTTGTGAGCGTCTGAATGAAGCGGGTTTTAGCGCCGAGCTAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU12480___yj    351 CAAGCTCATTTGTGAGCGTCTGAATGAAGCGGGTTTTAGCGCCGAGCTCA    400

BSNT_02113___    401 CTAATGAGAAAGACCGCCTGGCAGGTGTACACCCAAGCAATATTGTCAAT    450
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU12480___yj    401 CTAATGAGAAAGACCGCCTGGCAGGTGTACACCCAAACAATATTGTCAAT    450

BSNT_02113___    451 CGGACGAAAAGAGAAATGGGGCTGCAATTGGAGGTGAGCACGGCACAAAG    500
                     ||||||||||||||||||||.||||||||||||||.|||||||||||..|
BSU12480___yj    451 CGGACGAAAAGAGAAATGGGACTGCAATTGGAGGTAAGCACGGCACAGCG    500

BSNT_02113___    501 AAACGCGCTGTTCTGCAATTTTGGGTGCCGTGATAAAAGCTACATACAAA    550
                     |||.|||||.|||.||||||||||||||||||||||||||||||||||||
BSU12480___yj    501 AAATGCGCTATTCCGCAATTTTGGGTGCCGTGATAAAAGCTACATACAAA    550

BSNT_02113___    551 ACGACTTGTTTGATCGATATGTGGAAGCCGTCAAGCTTGGCTTTTATACA    600
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU12480___yj    551 ACGATTTGTTTGATCGATATGTGGAAGCCGTCAAGCTTGGCTTTTATACA    600

BSNT_02113___    601 TAA    603
                     |||
BSU12480___yj    601 TAA    603


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