Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02107 and BSU12430
See
Amino acid alignment /
Visit
BSNT_02107 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:31
# Commandline: needle
# -asequence dna-align/BSNT_02107___rapA.1.22522.seq
# -bsequence dna-align/BSU12430___rapA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02107___rapA-BSU12430___rapA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02107___rapA-BSU12430___rapA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02107___rapA
# 2: BSU12430___rapA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1137
# Identity: 1123/1137 (98.8%)
# Similarity: 1123/1137 (98.8%)
# Gaps: 6/1137 ( 0.5%)
# Score: 5583.0
#
#
#=======================================
BSNT_02107___ 1 ------ATGAAGCAGACGATTCCGTCCTCTTATGTCGGGCTTAAAATTAA 44
||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 1 TTGAGGATGAAGCAGACGATTCCGTCCTCTTATGTCGGGCTTAAAATTAA 50
BSNT_02107___ 45 TGAATGGTATACTCATATCCGGCAGTTCCACGTCGCTGAAGCCGAACGGG 94
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 51 TGAATGGTATACTCATATCCGGCAGTTCCACGTCGCTGAAGCCGAACGGG 100
BSNT_02107___ 95 TCAAGCTCGAAGTAGAAAGAGAAATTGAGGATATGGAAGAAGACCAAGAT 144
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 101 TCAAGCTCGAAGTAGAAAGAGAAATTGAGGATATGGAAGAAGACCAAGAT 150
BSNT_02107___ 145 TTGCTGCTGTATTATTCTTTAATGGAGTTCAGGCATCGTGTCATGCTGGA 194
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU12430___ra 151 TTGCTGCTGTATTATTCTTTAATGGAGTTCAGGCACCGTGTCATGCTGGA 200
BSNT_02107___ 195 TTACATTAAGCCTTTTGGAGAGGACACGTCGCAGCTAGAGTTTTCAGAAT 244
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 201 TTACATTAAGCCTTTTGGAGAGGACACGTCGCAGCTAGAGTTTTCAGAAT 250
BSNT_02107___ 245 TATTAGAAGACATCGAAGGGAATCAGTACAAGCTGACAGGGCTTCTCGAA 294
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 251 TGTTAGAAGACATCGAAGGGAATCAGTACAAGCTGACAGGGCTTCTCGAA 300
BSNT_02107___ 295 TATTACTTTAATTTTTTTCGAGGAATGTATGAATTTAAGCAGAAGATGTT 344
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 301 TATTACTTTAATTTTTTTCGAGGAATGTATGAATTTAAGCAGAAGATGTT 350
BSNT_02107___ 345 TGTCAGTGCCATGATGTATTATAAACGGGCAGAAAAGAATCTTGCCCTCG 394
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 351 TGTCAGTGCCATGATGTATTATAAACGGGCAGAAAAGAATCTTGCCCTCG 400
BSNT_02107___ 395 TCTCGGATGATATTGAGAAAGCCGAGTTTGCTTTTAAAATGGCTGAGATT 444
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU12430___ra 401 TCTCGGATGATATTGAGAAAGCAGAGTTTGCTTTTAAAATGGCTGAGATT 450
BSNT_02107___ 445 TTTTACAATTTAAAACAAACCTATGTTTCGATGAGCTACGCCGTTCAGGC 494
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 451 TTTTACAATTTAAAACAAACCTATGTTTCGATGAGCTACGCCGTTCAGGC 500
BSNT_02107___ 495 ATTAGAAACATACCAAATGTATGAAACGTACACCGTCCGCAGAATCCAAT 544
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 501 ATTAGAAACATACCAAATGTATGAAACGTACACCGTCCGCAGAATCCAAT 550
BSNT_02107___ 545 GTGAATTCGTTATTGCAGGTAATTATGATGATATGCAGTATCCAGAAAGA 594
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 551 GTGAATTCGTTATTGCAGGTAATTATGATGATATGCAGTATCCAGAAAGA 600
BSNT_02107___ 595 GCATTGCCCCACTTAGAACTGGCTTTAGATCTTGCAAAGAAGGAAGGCAA 644
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU12430___ra 601 GCATTGCCCCACTTAGAACTGGCTTTAGATCTTGCAAAGAAAGAAGGCAA 650
BSNT_02107___ 645 TCCCCGCCTGATCAGTTCCGCCCTATATAATCTCGGAAACTGCTATGAGA 694
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU12430___ra 651 TCCCCGCCTGATCAGTTCTGCCCTATATAATCTCGGAAACTGCTATGAGA 700
BSNT_02107___ 695 AAATGGGTGAACTGCAAAAGGCAGCCGAATACTTTGAGAAATCTGTTTCT 744
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU12430___ra 701 AAATGGGTGAACTGCAAAAGGCAGCCGAATACTTTGGGAAATCTGTTTCT 750
BSNT_02107___ 745 ATTTGCAAGTCGGAAAAGTTCGATAATCTTCCGCATTCTATCTACTCTTT 794
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 751 ATTTGCAAGTCGGAAAAGTTCGATAATCTTCCGCATTCTATCTACTCTTT 800
BSNT_02107___ 795 AACACAAGTTCTGTATAAACAAAAAAATGACGCCGAAGCGCAAAAAAAGT 844
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 801 AACACAAGTTCTGTATAAACAAAAAAATGACGCCGAAGCGCAAAAAAAGT 850
BSNT_02107___ 845 ATCGTGAAGGATTGGAAATCGCCCGTCAATACAGTGATGAATTATTCGTG 894
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU12430___ra 851 ATCGTGAAGGATTGGAAATCGCCCGTCAATACAGTGATGAATTATTTGTG 900
BSNT_02107___ 895 GAGCTTTTTCAATTTTTACATGCGTTATACGGAAAAAACATTGACACAGA 944
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 901 GAGCTTTTTCAATTTTTACATGCGTTATACGGAAAAAACATTGACACAGA 950
BSNT_02107___ 945 ATCGGTCTCACACACCTTTCAATTTCTTGAAGAACATATGCTGTATCCTT 994
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 951 ATCAGTCTCACACACCTTTCAATTTCTTGAAGAACATATGCTGTATCCTT 1000
BSNT_02107___ 995 ATATTGAAGAGCTGGCGCATGATGCTGCCCAATTCTATATAGAAAACGGA 1044
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 1001 ATATTGAAGAGCTGGCGCATGATGCTGCCCAATTCTATATAGAAAACGGA 1050
BSNT_02107___ 1045 CAGCCCGAAAAAGCACTTTCATTTTATGAGAAAATGGTGCACGCACAAAA 1094
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12430___ra 1051 CAGCCCGAAAAAGCACTTTCATTTTATGAGAAAATGGTGCACGCACAAAA 1100
BSNT_02107___ 1095 ACAAATCCAGAGAGGAGATTGTTTATATGAAATCTAA 1131
|||||||||||||||||||||||||||||||||||||
BSU12430___ra 1101 ACAAATCCAGAGAGGAGATTGTTTATATGAAATCTAA 1137
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.