Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02101 and BSU12410

See Amino acid alignment / Visit BSNT_02101 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:31
# Commandline: needle
#    -asequence dna-align/BSNT_02101___yjoA.1.22522.seq
#    -bsequence dna-align/BSU12410___yjoA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02101___yjoA-BSU12410___yjoA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02101___yjoA-BSU12410___yjoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02101___yjoA
# 2: BSU12410___yjoA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity:     461/465 (99.1%)
# Similarity:   461/465 (99.1%)
# Gaps:           0/465 ( 0.0%)
# Score: 2289.0
# 
#
#=======================================

BSNT_02101___      1 ATGAGCCAATCCAATCAAATTGTCAGCCATTTTTTATCCCATCGAAACGT     50
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU12410___yj      1 ATGTGCCAATCCAATCAAATTGTCAGCCATTTTTTATCCCATCGAAACGT     50

BSNT_02101___     51 GACCAATGAGCTTGCCGAAAAAATCAGCAAAGACCATTACAGCTACAAAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12410___yj     51 GACCAATGAGCTTGCCGAAAAAATCAGCAAAGACCATTACAGCTACAAAC    100

BSNT_02101___    101 CGGCAGAAACATCAATGTCAGCAGAAGAGCTGGTCAAACACATTCTTACG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12410___yj    101 CGGCAGAAACATCAATGTCAGCAGAAGAGCTGGTCAAACACATTCTTACG    150

BSNT_02101___    151 TCTTTCCACTTGTTCGCAAATGTCATTAAAGAAGGCAATGCCTCACCTTT    200
                     |||||||||||||||||||||||||||||.|||||||||||||||||.||
BSU12410___yj    151 TCTTTCCACTTGTTCGCAAATGTCATTAAGGAAGGCAATGCCTCACCATT    200

BSNT_02101___    201 TCAAAACAAGCAGGAAGAAACAGAAACAGATCTCAATGTTCTGGCAAAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12410___yj    201 TCAAAACAAGCAGGAAGAAACAGAAACAGATCTCAATGTTCTGGCAAAAA    250

BSNT_02101___    251 CATATACAGAAAAAACGGCCGCTATCCTTGAACAGCTGACTGAAGAGCAG    300
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU12410___yj    251 CATATACAGAAAAAACGGTCGCTATCCTTGAACAGCTGACTGAAGAGCAG    300

BSNT_02101___    301 CTGGACAGAGAAATTGATCTGACATCCGCTTTCGGCAGAAAAGTCACAGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12410___yj    301 CTGGACAGAGAAATTGATCTGACATCCGCTTTCGGCAGAAAAGTCACAGG    350

BSNT_02101___    351 CCGCGCGCTGCTTCAGCTTGCAATGGAGCATGAAATTCACCATAAAGGCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12410___yj    351 CCGCGCGCTGCTTCAGCTTGCAATGGAGCATGAAATTCACCATAAAGGCA    400

BSNT_02101___    401 ACCTGTTCGTGTATGTGCGGGAAATGGGCCACACTGAGCTTCCTTTCTAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12410___yj    401 ACCTGTTCGTGTATGTGCGGGAAATGGGCCACACTGAGCTTCCTTTCTAT    450

BSNT_02101___    451 CAGCAGCGCATGTAG    465
                     |||||||||||||||
BSU12410___yj    451 CAGCAGCGCATGTAG    465


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