Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02097 and BSU12370

See Amino acid alignment / Visit BSNT_02097 in genome browser / Return to Orthologue table 
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:30
# Commandline: needle
#    -asequence dna-align/BSNT_02097___exuR.1.22522.seq
#    -bsequence dna-align/BSU12370___exuR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02097___exuR-BSU12370___exuR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02097___exuR-BSU12370___exuR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02097___exuR
# 2: BSU12370___exuR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1002
# Identity:     987/1002 (98.5%)
# Similarity:   987/1002 (98.5%)
# Gaps:           0/1002 ( 0.0%)
# Score: 4875.0
# 
#
#=======================================

BSNT_02097___      1 ATGGTAACCATAAAAGATATCGCAAAACTCGCAAACGTATCCCACACAAC     50
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU12370___ex      1 ATGGTAACCATAAAAGATATCGCAAAACTCGCAAACGTATCCCACACTAC     50

BSNT_02097___     51 CGTTTCCAGAGCACTCAACAACAGCCCTTACATCAAAGAACATACGAAGA    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU12370___ex     51 TGTTTCCAGAGCACTCAACAACAGCCCTTACATCAAAGAACATACGAAGA    100

BSNT_02097___    101 AAAAGATATTAGAGCTAGCAGAGCAGCTCAACTATACACCAAATGTAAAT    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU12370___ex    101 AAAAAATATTAGAGCTAGCAGAGCAGCTCAACTATACACCAAATGTAAAT    150

BSNT_02097___    151 GCGAAAAGTCTGGCGATGCAAAAGTCGCATACGATCGGGCTATTCTTTAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12370___ex    151 GCGAAAAGTCTGGCGATGCAAAAGTCGCATACGATCGGGCTATTCTTTAC    200

BSNT_02097___    201 AAGCATTACAAACGGAACCTCACACAGCTTCTTTGCAGACACAATCAAAG    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU12370___ex    201 AAGCATTACAAACGGAACCTCACACAGCTTCTTTGCAGACACTATCAAAG    250

BSNT_02097___    251 GCGTCAATCAAGCCATAAGTGAGGATTACAATCTGTATGTGCGCGGCATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12370___ex    251 GCGTCAATCAAGCCATAAGTGAGGATTACAATCTGTATGTGCGCGGCATT    300

BSNT_02097___    301 GATGATCTGAAAAACTATGACTCCGTTACACCGATGAGATATGACGGCAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12370___ex    301 GATGATCTGAAAAACTATGACTCCGTTACACCGATGAGATATGACGGCAT    350

BSNT_02097___    351 CATTTTAATGAGCCAAAGTGACATTGATAATTCTTTTATTTACCATATTC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12370___ex    351 CATTTTAATGAGCCAAAGTGACATTGATAATTCTTTTATTTACCATATTC    400

BSNT_02097___    401 GCGAAAAAAACATTCCGCTTGTCGTGCTGAATCGTGATATTGATGATCGC    450
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU12370___ex    401 GCGAAAAAAACATTCCGCTTGTCGTGCTGAATCGTGATATTGATGATCGT    450

BSNT_02097___    451 ACCATCACGAATATTTTGTCCAATGACAAGGAAGGCTCTCAAGAAGCTGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12370___ex    451 ACCATCACGAATATTTTGTCCAATGACAAGGAAGGCTCTCAAGAAGCTGT    500

BSNT_02097___    501 AGAATACTTCATTCAGTCCGGCCATCAAGACATCGCCATCATCGAGGGGA    550
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU12370___ex    501 AGAATACTTCATTCAGTCCGGACATCAAGACATCGCCATCATCGAGGGGA    550

BSNT_02097___    551 TCGAAGGCTTTAAATCCTCCCAGCAGCGAAAGGAAGGCTACTTATCTGCA    600
                     |||||||||||||||||||||||||||||||||||||.||||||||.|||
BSU12370___ex    551 TCGAAGGCTTTAAATCCTCCCAGCAGCGAAAGGAAGGGTACTTATCCGCA    600

BSNT_02097___    601 CTGATTCAACATCATATTCCGATCAAGCATGAATACAGTGTCAAAGGACA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12370___ex    601 CTGATTCAACATCATATTCCGATCAAGCATGAATACAGTGTCAAAGGACA    650

BSNT_02097___    651 GTACGATATGGAAAGCGGCTTTCAAGCGATGGAGAGGCTGCTGGCACTGC    700
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU12370___ex    651 GTACGATATGGAAAGCGGCTTTCAAGCGATGGAGCGGCTGCTGGCACTGC    700

BSNT_02097___    701 CGAATCCTCCAACCGCTGTTTTTTGTTCGAATGATGACATGGCAATCGGA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12370___ex    701 CGAATCCTCCAACCGCTGTTTTTTGTTCGAATGATGACATGGCAATCGGA    750

BSNT_02097___    751 GCGATGAATGCGATATTCGCAAAGGGCCTGCGCGTTCCTGATGATATTTC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12370___ex    751 GCGATGAATGCGATATTCGCAAAGGGCCTGCGCGTTCCTGATGATATTTC    800

BSNT_02097___    801 GGTGATCGGGTTTGATGATATTGGGTTTTCACAGTACATCACGCCAAGAC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU12370___ex    801 GGTGATCGGGTTTGATGATATTGGGTTTTCACAGTACATCACGCCAAGGC    850

BSNT_02097___    851 TTACAACAGTAAAGCGCCCAGTGGAGAAAATCAGCGTGCTCGGTGCGCAA    900
                     ||.||||||||||||||||||||||||||||.||||||||||||||||||
BSU12370___ex    851 TTTCAACAGTAAAGCGCCCAGTGGAGAAAATAAGCGTGCTCGGTGCGCAA    900

BSNT_02097___    901 AAACTCTTGTCTCTGATCAGCGAGCCCGAAACAAAAGCAGAAAAAATCTT    950
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU12370___ex    901 AAACTCTTGTCGCTGATCAGCGAGCCCGAAACAAAAGCAGAAAAAATCTT    950

BSNT_02097___    951 GGAAAACACAAAATTCATGGTGCGTGATTCAGTCAGACGATTGACGACGT   1000
                     ||||||||||.||||.||||||||||||||||||||||||||||||||||
BSU12370___ex    951 GGAAAACACAGAATTTATGGTGCGTGATTCAGTCAGACGATTGACGACGT   1000

BSNT_02097___   1001 GA   1002
                     ||
BSU12370___ex   1001 GA   1002


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