Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02087 and BSU12300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:29
# Commandline: needle
# -asequence dna-align/BSNT_02087___uxaC.1.22522.seq
# -bsequence dna-align/BSU12300___uxaC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02087___uxaC-BSU12300___uxaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02087___uxaC-BSU12300___uxaC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02087___uxaC
# 2: BSU12300___uxaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1440
# Identity: 1395/1440 (96.9%)
# Similarity: 1395/1440 (96.9%)
# Gaps: 18/1440 ( 1.2%)
# Score: 6867.0
#
#
#=======================================
BSNT_02087___ 1 ATGAAAGACGGTGAGGACATGGAACCCTTCATGGGCGAAAACTTTTTATT 50
||||||||||||||||||.|||||||||||||
BSU12300___ux 1 ------------------ATGGAACCCTTCATGGGCAAAAACTTTTTATT 32
BSNT_02087___ 51 GAAAAATGAAACCGCTGTCAGTCTCTATCACAATTATGCGAAAGACATGC 100
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU12300___ux 33 GAAAAATGAAACCGCTGTCAGCCTCTATCACAATTATGCGAAAGACATGC 82
BSNT_02087___ 101 CAATTATTGATTACCACTGCCACTTAAGTCCGAAAGAAATCTATGAAAAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 83 CAATTATTGATTACCACTGCCACTTAAGTCCGAAAGAAATCTATGAAAAT 132
BSNT_02087___ 151 AGTACATTTCAAAACATCACGGAAGCCTGGTTGTATGGTGACCATTATAA 200
|..|||||||||||||||||||||||||||.|||||||||||||||||||
BSU12300___ux 133 AAGACATTTCAAAACATCACGGAAGCCTGGCTGTATGGTGACCATTATAA 182
BSNT_02087___ 201 ATGGCGCATCATGAGAGCCAATGGAATTGAGGAGACATACATCACCGGAG 250
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU12300___ux 183 ATGGCGCATCATGAGAGCCAATGGAATTGAGGAGACATACATTACCGGAG 232
BSNT_02087___ 251 ATGCGCCTGATGAGGAGAAATTTATGGCTTGGGCGAAAACCGTGCCGATG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 233 ATGCGCCTGATGAGGAGAAATTTATGGCTTGGGCGAAAACCGTGCCGATG 282
BSNT_02087___ 301 GCGATTGGCAATCCGCTCTACAACTGGACTCACTTAGAATTGCAGCGTTT 350
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU12300___ux 283 GCGATTGGCAACCCGCTCTACAACTGGACTCACTTAGAATTGCAGCGTTT 332
BSNT_02087___ 351 TTTTGGCATTTATGAGATTTTAAACGAGAAGTCCGGGCCGGCTATATGGA 400
||||||||||||.||||||||||||||||||||||||.||||||||||||
BSU12300___ux 333 TTTTGGCATTTACGAGATTTTAAACGAGAAGTCCGGGTCGGCTATATGGA 382
BSNT_02087___ 401 AACGGACAAATGAACTGCTCAAAGGGGAAGGCTTCGGGGCAAGGGATTTA 450
|||.|||||||.||||||||||||||||||||||||||||||||||||||
BSU12300___ux 383 AACAGACAAATAAACTGCTCAAAGGGGAAGGCTTCGGGGCAAGGGATTTA 432
BSNT_02087___ 451 ATCGTGAAATCAAATGTAAAGGTCGTGTGTACAACAGATGACCCTGTTGA 500
|||||||||||||||||||||||||||||.||.|||||||||||||||||
BSU12300___ux 433 ATCGTGAAATCAAATGTAAAGGTCGTGTGCACCACAGATGACCCTGTTGA 482
BSNT_02087___ 501 TTCTCTTGAATACCATCTATTATTAAGAGAAGACAAAGACTTTCCTGTCA 550
||||||||||||||||.||||.||||.|||||||||||||||||||||||
BSU12300___ux 483 TTCTCTTGAATACCATTTATTGTTAAAAGAAGACAAAGACTTTCCTGTCA 532
BSNT_02087___ 551 GCGTGCTGCCTGGATTTCGGCCGGATAAAGGACTTGAGATCAATCGTGAA 600
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 533 GTGTGCTGCCTGGATTTCGGCCGGATAAAGGACTTGAGATCAATCGTGAA 582
BSNT_02087___ 601 GGCTTTCCTGAGTGGGTGCAGGCGCTTGAAGATGCCGCCGCCATATCGAT 650
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU12300___ux 583 GGCTTTCCTGAGTGGGTGCAGGCGCTTGAAGATGCCGCTGCCATATCGAT 632
BSNT_02087___ 651 TACAACCTATGATGAGTTTTTAAAGGCGTTGGAAAAACGAGTGCGATTCT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 633 TACAACCTATGATGAGTTTTTAAAGGCGTTGGAAAAACGAGTGCGATTCT 682
BSNT_02087___ 701 TCCACTCAGCCGGCGGCAGAGTTTCTGATCACGCGATAGATTCAATGGTA 750
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU12300___ux 683 TCCACTCAGCCGGCGGCAGAGTTTCTGATCACGCGATAGATACAATGGTA 732
BSNT_02087___ 751 TTTGCCGAAACAACAAAAGAAGAAGCTGGACGGATTTTTTCTGACAGATT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 733 TTTGCCGAAACAACAAAAGAAGAAGCTGGACGGATTTTTTCTGACAGATT 782
BSNT_02087___ 801 ACAAGGAACAGAGGTTTCTGAGGAAGCTGAGAAGAAATTTAAGACATATA 850
|||||||||||||||||||...||||.|||||||||||||||||||||||
BSU12300___ux 783 ACAAGGAACAGAGGTTTCTTGTGAAGATGAGAAGAAATTTAAGACATATA 832
BSNT_02087___ 851 CGCTTCAGTTTCTTTGCGGTTTGTATGCGGAGCTCGATTGGGCGATGCAG 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 833 CGCTTCAGTTTCTTTGCGGTTTGTATGCGGAGCTCGATTGGGCGATGCAG 882
BSNT_02087___ 901 TTTCATATCAACGCTTTAAGAAACACGAATACAAAAATGATGAAAAGGCT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 883 TTTCATATCAACGCTTTAAGAAACACGAATACAAAAATGATGAAAAGGCT 932
BSNT_02087___ 951 CGGACCTGATACAGGCTATGATTCTATGAACGATGAAGAAATTGCTAAGC 1000
|||||||||||||||.||||||||.|||||||||||||||||||||||||
BSU12300___ux 933 CGGACCTGATACAGGGTATGATTCAATGAACGATGAAGAAATTGCTAAGC 982
BSNT_02087___ 1001 CTTTATACAAGCTTCTGAACTCAGTTGAGATGAAGAACCAGCTGCCGAAA 1050
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU12300___ux 983 CTTTATACAAGCTGCTGAACTCAGTTGAGATGAAGAACCAGCTGCCGAAA 1032
BSNT_02087___ 1051 ACGATTTTATATTCACTGAATCCAAACGATAACTATGTCATCGCCAGCAT 1100
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU12300___ux 1033 ACGATTTTATATTCACTGAATCCAAATGATAACTATGTCATCGCCAGCAT 1082
BSNT_02087___ 1101 GATCAACAGTTTTCAGGACGGTATTACCCCGGGAAAAATACAATTCGGCA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 1083 GATCAACAGTTTTCAGGACGGTATTACCCCGGGAAAAATACAATTCGGCA 1132
BSNT_02087___ 1151 CAGCCTGGTGGTTTAACGATACTAAAGACGGAATGCTCGACCAAATGAAA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 1133 CAGCCTGGTGGTTTAACGATACTAAAGACGGAATGCTCGACCAAATGAAA 1182
BSNT_02087___ 1201 GCGTTATCAAATGTTGGCCTTTTCAGCCGTTTTATCGGCATGCTCACCGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 1183 GCGTTATCAAATGTTGGCCTTTTCAGCCGTTTTATCGGCATGCTCACCGA 1232
BSNT_02087___ 1251 TTCCAGAAGCTTTCTTTCGTATACGCGCCACGAATATTTCAGGCGGATCG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 1233 TTCCAGAAGCTTTCTTTCGTATACGCGCCACGAATATTTCAGGCGGATCG 1282
BSNT_02087___ 1301 TCTGCAATTTGATTGGAGAATGGGTGGAAAACGGCGAAGTGCCGCGCGAT 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 1283 TCTGCAATTTGATTGGAGAATGGGTGGAAAACGGCGAAGTGCCGCGCGAT 1332
BSNT_02087___ 1351 ATGGAGCTTCTGGGAAGCATCGTTCAGGGGATTTGCTATGACAATGCGAA 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 1333 ATGGAGCTTCTGGGAAGCATCGTTCAGGGGATTTGCTATGACAATGCGAA 1382
BSNT_02087___ 1401 ACACTACTTTCAATTTCAAGAAGAGAAAGCAAACGTGTAA 1440
||||||||||||||||||||||||||||||||||||||||
BSU12300___ux 1383 ACACTACTTTCAATTTCAAGAAGAGAAAGCAAACGTGTAA 1422
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