Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02082 and BSU12270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:28
# Commandline: needle
# -asequence dna-align/BSNT_02082.1.22522.seq
# -bsequence dna-align/BSU12270___yjlB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02082-BSU12270___yjlB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02082-BSU12270___yjlB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02082
# 2: BSU12270___yjlB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity: 258/498 (51.8%)
# Similarity: 258/498 (51.8%)
# Gaps: 225/498 (45.2%)
# Score: 1230.0
#
#
#=======================================
BSNT_02082 0 -------------------------------------------------- 0
BSU12270___yj 1 ATGGAAAGAGAGACACAGACATACTTCTTTCCGGATGACGGCAGGATTCC 50
BSNT_02082 0 -------------------------------------------------- 0
BSU12270___yj 51 GAATCACCCTGATTTTCCGCTCGTGGTGTATCAAAACGCGCTTAAGGACA 100
BSNT_02082 0 -------------------------------------------------- 0
BSU12270___yj 101 CCGGACTGGCAGAGCGGATCGTCACCCGGCATGGCTGGTCAAACAGCTGG 150
BSNT_02082 0 -------------------------------------------------- 0
BSU12270___yj 151 TCAGGGAGTGTTTTTCCATACCATCATTATCACAGCAATACGCATGAAGT 200
BSNT_02082 1 -------------------------GTGATTCAGTTTGGGGGAGAAAAAG 25
|||||||||||||||||||||||||
BSU12270___yj 201 CCTGATTGCCCTTAGGAGAGAGGCTGTGATTCAGTTTGGGGGAGAAAAAG 250
BSNT_02082 26 GGGCTGCCATTCCTTTCAAATCCGGCGACGCAGTCGTGATTCCAGCCGGA 75
||||||||||.|||||||||||.|||||||||||||||||||||||||||
BSU12270___yj 251 GGGCTGCCATCCCTTTCAAATCAGGCGACGCAGTCGTGATTCCAGCCGGA 300
BSNT_02082 76 GTCGGCCATAAAAAGCTAAGCGCAAGCTCCGATTTTACCGTCATTGGCGC 125
|||||.|||||||||||.|||.|||||.||||||||||.|||.|||||||
BSU12270___yj 301 GTCGGACATAAAAAGCTCAGCTCAAGCCCCGATTTTACTGTCCTTGGCGC 350
BSNT_02082 126 TTATCCGGGAGGCGTTCAGTATGATATGAAGACGGGAGAGCCGAATGAAC 175
.|||||.||.|||||||||||.||||||||||||||..||||||||||.|
BSU12270___yj 351 CTATCCCGGTGGCGTTCAGTACGATATGAAGACGGGGAAGCCGAATGAGC 400
BSNT_02082 176 GGGAGGAAGCGGTCAAACAGATTAAGCAGGCGGCGTTGCCGGCGAATGAT 225
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12270___yj 401 GGGAGGAAGCGGTCAAACAGATTAAGCAGGCGGCGTTGCCGGCGAATGAT 450
BSNT_02082 226 CCGATCACAGGAAAAAGAGAGCCTCTATTGGAAATATGGGTAAAGTGA 273
||||||||||||||||||||||||||||||||||||||||||||||||
BSU12270___yj 451 CCGATCACAGGAAAAAGAGAGCCTCTATTGGAAATATGGGTAAAGTGA 498
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