Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02078 and BSU12250

See Amino acid alignment / Visit BSNT_02078 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:28
# Commandline: needle
#    -asequence dna-align/BSNT_02078___yjkB.1.22522.seq
#    -bsequence dna-align/BSU12250___yjkB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02078___yjkB-BSU12250___yjkB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02078___yjkB-BSU12250___yjkB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02078___yjkB
# 2: BSU12250___yjkB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 753
# Identity:     750/753 (99.6%)
# Similarity:   750/753 (99.6%)
# Gaps:           0/753 ( 0.0%)
# Score: 3738.0
# 
#
#=======================================

BSNT_02078___      1 ATGGAAGCAAACGATCAAACACAAAACATACCAGCCATCTCCTTCAGATC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12250___yj      1 ATGGAAGCAAACGATCAAACACAAAACATACCAGCCATCTCCTTCAGATC     50

BSNT_02078___     51 AGTCAGAAAAAGCTATAAACAAGATGGACAAACCTATGATGTGCTGCAGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12250___yj     51 AGTCAGAAAAAGCTATAAACAAGATGGACAAACCTATGATGTGCTGCAGG    100

BSNT_02078___    101 ATGTCACCGGAGACATTCAACAGGGCGCAATCGTAGCCGTTTTAGGTCCT    150
                     |||||||||||||||||||||||||.||||||||||||||||||||.|||
BSU12250___yj    101 ATGTCACCGGAGACATTCAACAGGGTGCAATCGTAGCCGTTTTAGGCCCT    150

BSNT_02078___    151 TCCGGCTCAGGCAAAAGCACCCTCCTTTCTATGTGTAATTTAATGAGAAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12250___yj    151 TCCGGCTCAGGCAAAAGCACCCTCCTTTCTATGTGTAATTTAATGAGAAC    200

BSNT_02078___    201 GCCTGACAGCGGCGAAGTCAACATATACGGAAAGGAAGTCAGAGAATGGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12250___yj    201 GCCTGACAGCGGCGAAGTCAACATATACGGAAAGGAAGTCAGAGAATGGA    250

BSNT_02078___    251 ATGTCAATGAGCTGAGGCGAACGGCAGCCCTCGCGTTTCAATCGGCTCCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12250___yj    251 ATGTCAATGAGCTGAGGCGAACGGCAGCCCTCGCGTTTCAATCGGCTCCC    300

BSNT_02078___    301 GTGCTCGACGGGACAGTGCGTGACAATTTAAGTCTTGTACAAAGGCTGCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12250___yj    301 GTGCTCGACGGGACAGTGCGTGACAATTTAAGTCTTGTACAAAGGCTGCA    350

BSNT_02078___    351 TCAATCCCAGCTGTACTCTCCTGAAAAGCTGGCTTCGCTTGCAGGGCTGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12250___yj    351 TCAATCCCAGCTGTACTCTCCTGAAAAGCTGGCTTCGCTTGCAGGGCTGC    400

BSNT_02078___    401 CGCCAGAGTTGTTAGACAGAAGCGCCAGAGACTTATCGGGCGGGCAGCGG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12250___yj    401 CGCCAGAGTTGTTAGACAGAAGCGCCAGAGACTTATCGGGCGGGCAGCGG    450

BSNT_02078___    451 CAAAGACTGTCACTGGCCAGAACGCTCTCAAATCCTTCCTCCATTCTATT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12250___yj    451 CAAAGACTGTCACTGGCCAGAACGCTCTCAAATCCTTCCTCCATTCTATT    500

BSNT_02078___    501 GTTGGACGAAATCACATCGGCCTTGGACCCGGTTTCTGCTCTTGAGATTG    550
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU12250___yj    501 GTTGGACGAAATCACATCGGCCTTGGACCCGGTCTCTGCTCTTGAGATTG    550

BSNT_02078___    551 AAGAACTGATCAAACGTCAGCATCAAGAGAAAAAATGGACAGTCATGTGG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12250___yj    551 AAGAACTGATCAAACGTCAGCATCAAGAGAAAAAATGGACAGTCATGTGG    600

BSNT_02078___    601 GTCACTCATAATATGGAGCAGGCAAAACGAATAGCCGATACCATTTGGTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12250___yj    601 GTCACTCATAATATGGAGCAGGCAAAACGAATAGCCGATACCATTTGGTT    650

BSNT_02078___    651 TATGGCAGATGGCCGGCTGCTTGAAATCGCTGAAACCGACACATTTTTCT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12250___yj    651 TATGGCAGATGGCCGGCTGCTTGAAATCGCTGAAACCGACACATTTTTCT    700

BSNT_02078___    701 CCGCTCCGCAGCATGAAGCAGCGAAAGAATTTTTGAAGGGAGGCACTCGG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12250___yj    701 CCGCTCCGCAGCATGAAGCAGCGAAAGAATTTTTGAAGGGAGGCACTCGG    750

BSNT_02078___    751 TAA    753
                     |||
BSU12250___yj    751 TAA    753


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