Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02075 and BSU12230

See Amino acid alignment / Visit BSNT_02075 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:28
# Commandline: needle
#    -asequence dna-align/BSNT_02075___yjjA.1.22522.seq
#    -bsequence dna-align/BSU12230___yjjA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02075___yjjA-BSU12230___yjjA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02075___yjjA-BSU12230___yjjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02075___yjjA
# 2: BSU12230___yjjA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 813
# Identity:     812/813 (99.9%)
# Similarity:   812/813 (99.9%)
# Gaps:           0/813 ( 0.0%)
# Score: 4056.0
# 
#
#=======================================

BSNT_02075___      1 ATGGGAAAAGGGTTACTTGGAAAACGCGTGGCAATCGGTGGCTCACGAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj      1 ATGGGAAAAGGGTTACTTGGAAAACGCGTGGCAATCGGTGGCTCACGAAA     50

BSNT_02075___     51 AACGGAAGAAATTAGTACAATCATTGAAAAACAGGGCGGAATACCTGTCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj     51 AACGGAAGAAATTAGTACAATCATTGAAAAACAGGGCGGAATACCTGTCA    100

BSNT_02075___    101 TCCGGCCTCTCCAAGGTACAGTTTACTTAGCAGAGAAGCAGGTGGAGCCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj    101 TCCGGCCTCTCCAAGGTACAGTTTACTTAGCAGAGAAGCAGGTGGAGCCG    150

BSNT_02075___    151 GATTTGCGGACGTTTGCGGAAGAAAAAGCTGACTGGGTCATTTTCACGAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj    151 GATTTGCGGACGTTTGCGGAAGAAAAAGCTGACTGGGTCATTTTCACGAC    200

BSNT_02075___    201 AGGCATCGGGTTGGAGACTCTTGTCGATATGGCAGAGAAAATTGGACTGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj    201 AGGCATCGGGTTGGAGACTCTTGTCGATATGGCAGAGAAAATTGGACTGA    250

BSNT_02075___    251 AAGATGAGTTTCTGCAGGCCATTCGCCAAGCGAAAGCGGCATGCCGGGGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj    251 AAGATGAGTTTCTGCAGGCCATTCGCCAAGCGAAAGCGGCATGCCGGGGA    300

BSNT_02075___    301 TACAAAACGCTGTCTGCGCTGAAAAAGCTTGGAATCACACCGGAAGCTTC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj    301 TACAAAACGCTGTCTGCGCTGAAAAAGCTTGGAATCACACCGGAAGCTTC    350

BSNT_02075___    351 GGATGAAGACGGGACAACAAGAGGCTTAATCCGTTCCTTGGAGCCTCACG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj    351 GGATGAAGACGGGACAACAAGAGGCTTAATCCGTTCCTTGGAGCCTCACG    400

BSNT_02075___    401 ACTTTTCAGGAAAAACAGTCATGGTGCAGCTTCATGGCGAAAAAGCGCCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj    401 ACTTTTCAGGAAAAACAGTCATGGTGCAGCTTCATGGCGAAAAAGCGCCG    450

BSNT_02075___    451 GCTCTCATGGCATTTCTTGAAGAAAAAGGCGCGTCTGTCCTGCCGATTCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj    451 GCTCTCATGGCATTTCTTGAAGAAAAAGGCGCGTCTGTCCTGCCGATTCT    500

BSNT_02075___    501 GCCTTATCAGCACATCCCGCCGGAGGAGGAAACGGTGGAGCAGTTATGCC    550
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU12230___yj    501 GCCTTATCAGCACATCCCGCCGGAGGAGGAAACGGTGGAGCGGTTATGCC    550

BSNT_02075___    551 GAGAGCTGATGAACGATGAGGTCGATGCCGTTTGTTTTACAACGGCCATT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj    551 GAGAGCTGATGAACGATGAGGTCGATGCCGTTTGTTTTACAACGGCCATT    600

BSNT_02075___    601 CAGGTTCGTTCCCTGTTTGATTTTGCCAAGGGGCGAGGTTATATCAATGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj    601 CAGGTTCGTTCCCTGTTTGATTTTGCCAAGGGGCGAGGTTATATCAATGA    650

BSNT_02075___    651 AGTGAAGAAGGTATTCGAAGAACGCGCCATCGCAGCTGCTGTCGGAAAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj    651 AGTGAAGAAGGTATTCGAAGAACGCGCCATCGCAGCTGCTGTCGGAAAAG    700

BSNT_02075___    701 TGACTGCTGAAGCACTGCGGGAAGAGGGCATTACGAGACTGCTTGCGCCA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj    701 TGACTGCTGAAGCACTGCGGGAAGAGGGCATTACGAGACTGCTTGCGCCA    750

BSNT_02075___    751 GAGATTGAGCGGATGGGTGCGATGATTGTTGAGCTGGCCAAGTATTATGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12230___yj    751 GAGATTGAGCGGATGGGTGCGATGATTGTTGAGCTGGCCAAGTATTATGA    800

BSNT_02075___    801 AGAAAAGGAATAA    813
                     |||||||||||||
BSU12230___yj    801 AGAAAAGGAATAA    813


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.