Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02069 and BSU12200

See Amino acid alignment / Visit BSNT_02069 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:27
# Commandline: needle
#    -asequence dna-align/BSNT_02069___yjiA.1.22522.seq
#    -bsequence dna-align/BSU12200___yjiA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02069___yjiA-BSU12200___yjiA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02069___yjiA-BSU12200___yjiA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02069___yjiA
# 2: BSU12200___yjiA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     279/279 (100.0%)
# Similarity:   279/279 (100.0%)
# Gaps:           0/279 ( 0.0%)
# Score: 1395.0
# 
#
#=======================================

BSNT_02069___      1 GTGGCAGCACAGACTGATTACAAAAAACAAGTTGTCGGAATCCTACTTTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12200___yj      1 GTGGCAGCACAGACTGATTACAAAAAACAAGTTGTCGGAATCCTACTTTC     50

BSNT_02069___     51 ACTTGCATTCGTACTCTTTGTGTTCTCTTTTTCTGAGAGACATGAAAAAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12200___yj     51 ACTTGCATTCGTACTCTTTGTGTTCTCTTTTTCTGAGAGACATGAAAAAC    100

BSNT_02069___    101 CGCTTGTTGAGGGAAAAAAACAGGAAAACTGGCATACTGTCGTCGACAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12200___yj    101 CGCTTGTTGAGGGAAAAAAACAGGAAAACTGGCATACTGTCGTCGACAAA    150

BSNT_02069___    151 GCCTCCGTCAAAATTTATGGCAGCCGATTAGTTGAAGAAAACAAATTAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12200___yj    151 GCCTCCGTCAAAATTTATGGCAGCCGATTAGTTGAAGAAAACAAATTAAA    200

BSNT_02069___    201 GCAAAAACTCGGCCATAAACAAGCCGATTCTATTTTGACCCTTCTGAAAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12200___yj    201 GCAAAAACTCGGCCATAAACAAGCCGATTCTATTTTGACCCTTCTGAAAC    250

BSNT_02069___    251 TCGCCAACGAAAAACACATTACATTATAA    279
                     |||||||||||||||||||||||||||||
BSU12200___yj    251 TCGCCAACGAAAAACACATTACATTATAA    279


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