Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02065 and BSU12170

See Amino acid alignment / Visit BSNT_02065 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:26
# Commandline: needle
#    -asequence dna-align/BSNT_02065___yjgD.1.22522.seq
#    -bsequence dna-align/BSU12170___yjgD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02065___yjgD-BSU12170___yjgD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02065___yjgD-BSU12170___yjgD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02065___yjgD
# 2: BSU12170___yjgD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 561
# Identity:     555/561 (98.9%)
# Similarity:   555/561 (98.9%)
# Gaps:           0/561 ( 0.0%)
# Score: 2751.0
# 
#
#=======================================

BSNT_02065___      1 ATGGCTAAAGCGATTAAACGAATCCAAAAAATCGAGGTAACAGAAGAGGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12170___yj      1 ATGGCTAAAGCGATTAAACGAATCCAAAAAATCGAGGTAACAGAAGAGGA     50

BSNT_02065___     51 TCAGCGAAAGCGTGATTTGCGGGAAATTGAAGATGCTCTAGTTGATCACA    100
                     ||||||||||||||||||||||||||||||||||||||||.||||.||||
BSU12170___yj     51 TCAGCGAAAGCGTGATTTGCGGGAAATTGAAGATGCTCTAATTGACCACA    100

BSNT_02065___    101 AAGAAGCGATTCTCGAAACCTTGCATATGCTGGGCCATATGAACGAGCGC    150
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU12170___yj    101 AAGAAGCGATTCTCGAAACATTGCATATGCTGGGCCATATGAACGAGCGC    150

BSNT_02065___    151 GGTGTCCTGCCGTTGCTCCGCGGCCTTTTTGGTCAAGGGGATAAAGTTCT    200
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU12170___yj    151 GGGGTCCTGCCGTTGCTCCGCGGCCTTTTTGGTCAAGGGGATAAAGTTCT    200

BSNT_02065___    201 TGATATCCTGGTGAAAAAGGCAGATACAGAGGAAACAGCCAATACGCTGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12170___yj    201 TGATATCCTGGTGAAAAAGGCAGATACAGAGGAAACAGCCAATACGCTGA    250

BSNT_02065___    251 AAAATCTGCTTCTTCTGTTTGGAACACTCGGCATGCTGGACGTGAAGCAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12170___yj    251 AAAATCTGCTTCTTCTGTTTGGAACACTCGGCATGCTGGACGTGAAGCAG    300

BSNT_02065___    301 CTGGAGCCTCTCATTTTGAAAGTGAATGCGGGTGTGGCAAGCGCTGTAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12170___yj    301 CTGGAGCCTCTCATTTTGAAAGTGAATGCGGGTGTGGCAAGCGCTGTAGA    350

BSNT_02065___    351 GCAGAAAAACAGTGAAGAAAAGACAGGTTATTTTGATATTATCCGCTCGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12170___yj    351 GCAGAAAAACAGTGAAGAAAAGACAGGTTATTTTGATATTATCCGCTCGC    400

BSNT_02065___    401 TAAAAGACCCGGAAATCAACAAATCAATTACACTGCTCTTTTCCTTTTTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12170___yj    401 TAAAAGACCCGGAAATCAACAAATCAATTACACTGCTCTTTTCCTTTTTA    450

BSNT_02065___    451 AAAGGAATGGGACAAGATACAAAGGAGCTGGAACGCACGACGCAGCCTCC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12170___yj    451 AAAGGAATGGGACAAGATACAAAGGAGCTGGAACGCACGACGCAGCCTCC    500

BSNT_02065___    501 GGAACACCAAAAATATCATCAGGAACCCCGAGAGAAAAGGGGAATGAATA    550
                     |||||||||||||.|||||||||||||||||||||||||.||||||||||
BSU12170___yj    501 GGAACACCAAAAACATCATCAGGAACCCCGAGAGAAAAGAGGAATGAATA    550

BSNT_02065___    551 AGCGAGATTGA    561
                     |||||||||||
BSU12170___yj    551 AGCGAGATTGA    561


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