Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02064 and BSU12160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:26
# Commandline: needle
# -asequence dna-align/BSNT_02064.1.22522.seq
# -bsequence dna-align/BSU12160___yjgC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02064-BSU12160___yjgC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02064-BSU12160___yjgC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02064
# 2: BSU12160___yjgC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2958
# Identity: 1427/2958 (48.2%)
# Similarity: 1427/2958 (48.2%)
# Gaps: 1500/2958 (50.7%)
# Score: 7011.0
#
#
#=======================================
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 1 ATGGCTGGCAAGAAAACAATCACAATAAACGGCGTTGAAATGGAAGCGTC 50
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 51 CGAGGAACAGACGGTGCTGCAGCTTTTGAATAACAGCTCGATTGAAGTGC 100
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 101 CGCAAGTTTGCTATCATCCAAGCTTAGGGCCGATTGAGACATGTGATACG 150
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 151 TGCATCGTCAGCATCAATGGTGAGCTGAAGAGGTCGTGCTCCGCTGAATT 200
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 201 AAAGGATGGGGATGTCATTGATACGCTCTCACCTGACGTGAAAAAAGCGC 250
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 251 AGGTCATCGGGATGGACAAGATTTTATATAATCATGAGCTTTATTGTACA 300
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 301 GTTTGCGATTACAACAATGGGGGATGCGAAATACATAATACGGTGAAGGA 350
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 351 AATGAAAATCAATCACCAAAGCATTCCGTTTGATCACAAGCCATACCATA 400
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 401 AGGATGAATCCCATCCGTTTTATCGGTATGATCCAGATCAATGTATATTG 450
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 451 TGCGGACGCTGTGTTGAGGCATGCCAAGACGTTCAGGTAACTGAAACGCT 500
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 501 GACCATTGACTGGGAGCGGAAACGCCCGCGCGTCATTTGGGATAACGACG 550
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 551 TGCCGATCAATGAGTCGTCATGTGTGTCATGCGGCCATTGTTCAACGGTC 600
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 601 TGTCCGTGCAACGCGATGATGGAAAAAGGAATGGAAGGGGAAGCCGGATA 650
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 651 TTTAACAGGCATCAATAACGAAACGCTGCGACCGATGATCGAGATCACGA 700
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 701 AAGGCGTAGAGACAGGCTACGGCTCGATTCTCGCGATTTCTGATATGGAA 750
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 751 TCGGCCATGCGTGATGAACGAATCAAAAAAACGAAAACCGTCTGCACGTA 800
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 801 TTGCGGCGTCGGCTGCAGCTTTGATGTCTGGACAAAGGGCAGAGACATTC 850
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 851 TGAAAGTAGAGCCGCAGGAGGAAGCGCCTGCCAACGGCATTTCTACTTGT 900
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 901 GTGAAAGGCAAGTTCGGCTGGGATTTCGTTAACAGCGAAGAACGCCTGAC 950
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 951 AAAGCCGCTGATCCGTGAAGGCGATCATTTCCGTGAAGCAGAGTGGGAGG 1000
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 1001 AGGCGTTATTGCTGATCGCCAGCAAGTTCACTGAATTAAAAGAGGCGTTT 1050
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 1051 GGCCCGGATTCTCTCGCTTTTATTACATCTTCTAAATGTACAAATGAAGA 1100
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 1101 ATCCTATCTTATGCAAAAGCTGGCCAGAGGGGTCATTGGCACAAATAATG 1150
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 1151 TGGACAACTGCTCTCGCTATTGCCAATCTCCTGCGACTGCCGGCCTGTTC 1200
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 1201 CGGACAGTCGGCTATGGCGGTGATTCAGGATCAATTACAGATATCGCGCA 1250
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 1251 AGCGGACCTTGTTTTGATTATCGGTTCGAACACGTCTGAGTCGCATCCAG 1300
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 1301 TCTTATCCACTCGGATTAAACGGGCTCATAAGCTGAGAGGGCAGAAAGTG 1350
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 1351 ATCGTCGCGGATATCAGAAAGCACGAAATGGCAGAGCGCTCAGATTTATT 1400
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 1401 TGTCCAGCCGCGTGCCGGATCGGATATCGTCTGGCTGAATGCGATCGCCA 1450
BSNT_02064 0 -------------------------------------------------- 0
BSU12160___yj 1451 AATATTTAATAGAAAACGGCAAGGCCGATGAACGATTTTTGAGAGAAAGA 1500
BSNT_02064 1 GTGAACGGACGGCATGAATATGTAAAAAGCATCGCGCCGTACACACTTGA 50
||||||||||||.|||||||||||||||||.|||||||||||||||||||
BSU12160___yj 1501 GTGAACGGACGGGATGAATATGTAAAAAGCCTCGCGCCGTACACACTTGA 1550
BSNT_02064 51 ATATGCTGAGGAGAAAACCGGGATTGATCAAGAAACCCTTATCCAAATGG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 1551 ATATGCTGAGGAGAAAACCGGGATTGATCAAGAAACCCTTATCCAAATGG 1600
BSNT_02064 101 CAGAGATGATCGGGCAAGCTGACAGTGTGTGCGCATTGTGGGCGATGGGC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 1601 CAGAGATGATCGGGCAAGCTGACAGTGTGTGCGCATTGTGGGCGATGGGC 1650
BSNT_02064 151 GTGACACAGCACATTGGAGGAAGCGACACGAGCACGGCGATCTCTAACCT 200
|||||||||||.|||||||||||||||||||||||||||||||||||.||
BSU12160___yj 1651 GTGACACAGCATATTGGAGGAAGCGACACGAGCACGGCGATCTCTAATCT 1700
BSNT_02064 201 GCTGCTTGTGACAGGAAACTACGGAAAACCGGGAGCAGGTTCTTACCCAT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 1701 GCTGCTTGTGACAGGAAACTACGGAAAACCGGGAGCAGGTTCTTACCCAT 1750
BSNT_02064 251 TGCGCGGTCATAATAACGTGCAGGGAGCAAGTGACTTCGGAAGTATGCCT 300
|||||||.|||||.|||||||||||||||||||||||.||.|||||||||
BSU12160___yj 1751 TGCGCGGCCATAACAACGTGCAGGGAGCAAGTGACTTTGGGAGTATGCCT 1800
BSNT_02064 301 GACAGAATGCCGGGCTATGAAAAAGTGACGGACGAACAAGTCCGCCAAAA 350
||||||.|.|||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 1801 GACAGACTACCGGGCTATGAAAAAGTGACGGACGAACAAGTCCGCCAAAA 1850
BSNT_02064 351 ATACGAGCAGGCGTGGGGCGTGCCGCTGCCGAAGAAGCCGGGTATGACCA 400
||||||||..|.||||||.|||||||||||||||.|||||||||||||||
BSU12160___yj 1851 ATACGAGCGTGTGTGGGGTGTGCCGCTGCCGAAGGAGCCGGGTATGACCA 1900
BSNT_02064 401 ACCACGAAATGATTGAAAAAATACATTCCGGACAGCTGAAAGCGATGTAT 450
||||||||||||||||||||||.||||||||||||.||||||||||||||
BSU12160___yj 1901 ACCACGAAATGATTGAAAAAATCCATTCCGGACAGTTGAAAGCGATGTAT 1950
BSNT_02064 451 GTAAAAGGTGAAGAAATGGGCTTGGTGGATTCCAACATCAATCATGTACA 500
|||||||||||||||||||||.|.||.||.|||||.||||||||||||||
BSU12160___yj 1951 GTAAAAGGTGAAGAAATGGGCCTTGTCGACTCCAATATCAATCATGTACA 2000
BSNT_02064 501 CGCCGCATATGAAAAGCTTGATTTCTTTGTGGTGCAGGACATTTTCCTTT 550
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 2001 CGCTGCATATGAAAAGCTTGATTTCTTTGTGGTGCAGGACATTTTCCTTT 2050
BSNT_02064 551 CACGTACAGCGGAGTTTGCTGATGTGGTTCTTCCTGCGAGCCCAAGCCTT 600
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU12160___yj 2051 CACGTACAGCGGAGTTTGCTGATGTGGTTCTTCCTGCGAGCCCGAGCCTT 2100
BSNT_02064 601 GAAAAAGAAGGAACCTTTACAAACACAGAACGCCGGATTCAGCGTTTGTA 650
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU12160___yj 2101 GAAAAAGAAGGAACGTTTACAAACACAGAACGCCGGATTCAGCGTTTGTA 2150
BSNT_02064 651 TCAGGTATTTGAACCGCTGGGTGAATCAAAGCTGGATTGGCAGATTATTA 700
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU12160___yj 2151 TCAGGTATTTGAACCGCTGGGTGAATCAAAGCCGGATTGGCAGATTATTA 2200
BSNT_02064 701 TGGAGGTTGCCAATAAGCTTGGCGCCGGTTGGCACTATGAGCATCCTGCA 750
||||||||||||||||||||||||||||.||||.||||||||||||||||
BSU12160___yj 2201 TGGAGGTTGCCAATAAGCTTGGCGCCGGCTGGCTCTATGAGCATCCTGCA 2250
BSNT_02064 751 GACATTATGGAGGAAGCAGCCAAGCTGTCGCCGATTTATGCCGGTGTCAC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 2251 GACATTATGGAGGAAGCAGCCAAGCTGTCGCCGATTTATGCCGGTGTCAC 2300
BSNT_02064 801 CTATAAACGTCTTGAGGGCTATCATTCCCTGCAATGGCCTGTAAACGCTG 850
||||.|||||||||||||||||.|||||||||||||||||||||||||||
BSU12160___yj 2301 CTATGAACGTCTTGAGGGCTATAATTCCCTGCAATGGCCTGTAAACGCTG 2350
BSNT_02064 851 ATGGAAAGGATTCGCCTTTACTCTTTACAGAGCGCTTCCCTTTCCCGGAC 900
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU12160___yj 2351 ATGGAAAGGATTCGCCTTTACTCTTTACAGAGCGCTTCCCTTTCCCAGAC 2400
BSNT_02064 901 GGCAAGGCCATTCTCTACCCTGTCCAGTGGACAGAGCCTAAGGAATTCGG 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 2401 GGCAAGGCCATTCTCTACCCTGTCCAGTGGACAGAGCCTAAGGAATTCGG 2450
BSNT_02064 951 TGAGGAATATGATATCCATGTCAACAATGGGCGGCTCTTGGAGCACTTCC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 2451 TGAGGAATATGATATCCATGTCAACAATGGGCGGCTCTTGGAGCACTTCC 2500
BSNT_02064 1001 ACGAAGGGAACCTGACTTACAAATCAAAAGGGATTTCGGAGAAAACACCG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 2501 ACGAAGGGAACCTGACTTACAAATCAAAAGGGATTTCGGAGAAAACACCG 2550
BSNT_02064 1051 GAAGTGTTCTTAGAAATTTCTCCTGAGCTTGCGGCAGAACGAGGGATTCA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 2551 GAAGTGTTCTTAGAAATTTCTCCTGAGCTTGCGGCAGAACGAGGGATTCA 2600
BSNT_02064 1101 GGACGGAACCCTCGTCAGACTCACATCGCCTTTCGGAAATGTCAAAGTGA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 2601 GGACGGAACCCTCGTCAGACTCACATCGCCTTTCGGAAATGTCAAAGTGA 2650
BSNT_02064 1151 AGTGCCTGATTACTGATCGAGTCAAAGGGAAGGAAGTATATCTGCCAATG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 2651 AGTGCCTGATTACTGATCGAGTCAAAGGGAAGGAAGTATATCTGCCAATG 2700
BSNT_02064 1201 AACGATTCAGGGGAAGCGGCGATCAACCTGTTAACAGGCAGCCATGCCGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 2701 AACGATTCAGGGGAAGCGGCGATCAACCTGTTAACAGGCAGCCATGCCGA 2750
BSNT_02064 1251 TAAGGATACCGATACGCCTGCTTACAAAGAAACATCGGCCAAGATGGAAA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 2751 TAAGGATACCGATACGCCTGCTTACAAAGAAACATCGGCCAAGATGGAAA 2800
BSNT_02064 1301 TTTTGAAGCACGACGGAATCAGCCCGCTGCCTAAGATCAACCACCGCAAC 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 2801 TTTTGAAGCACGACGGAATCAGCCCGCTGCCTAAGATCAACCACCGCAAC 2850
BSNT_02064 1351 GGCAATCCGCAGCCGCAAATCGGTGTGCAGGTTCATAAGAAATGGGCGCG 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 2851 GGCAATCCGCAGCCGCAAATCGGTGTGCAGGTTCATAAGAAATGGGCGCG 2900
BSNT_02064 1401 GAAGGATTATATTTTCCCTGGTGACGCTGTGAAAAGGGGGATGGGCCATA 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12160___yj 2901 GAAGGATTATATTTTCCCTGGTGACGCTGTGAAAAGGGGGATGGGCCATA 2950
BSNT_02064 1451 ATGGCTAA 1458
||||||||
BSU12160___yj 2951 ATGGCTAA 2958
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