Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02043 and BSU12060

See Amino acid alignment / Visit BSNT_02043 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:25
# Commandline: needle
#    -asequence dna-align/BSNT_02043___yjdI.1.22522.seq
#    -bsequence dna-align/BSU12060___yjdI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02043___yjdI-BSU12060___yjdI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02043___yjdI-BSU12060___yjdI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02043___yjdI
# 2: BSU12060___yjdI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 480
# Identity:     476/480 (99.2%)
# Similarity:   476/480 (99.2%)
# Gaps:           0/480 ( 0.0%)
# Score: 2364.0
# 
#
#=======================================

BSNT_02043___      1 ATGGCGAAAAAAATGGCAAAAACAAATGCGGTTCGTCTGATAGAACAGCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12060___yj      1 ATGGCGAAAAAAATGGCAAAAACAAATGCGGTTCGTCTGATAGAACAGCA     50

BSNT_02043___     51 GAACATCTCTTATGAGGTATTAGGGTATAAAACAGACGGCCAGCCGGTAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12060___yj     51 GAACATCTCTTATGAGGTATTAGGGTATAAAACAGACGGCCAGCCGGTAG    100

BSNT_02043___    101 ATGGCATCTCTGTTGCGGAAAAAATCGGTTATCCTTTGAAATATGTATAT    150
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU12060___yj    101 ATGGCATCTCTGTTGCGGAAAAAATCGGTTATTCTTTGAAATATGTATAT    150

BSNT_02043___    151 AAAACGTTGGTTGCAGCAACAGGAACAAATCATTATTATGTCTTTGTTGT    200
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU12060___yj    151 AAAACGTTGGTTGCAGCAGCAGGAACAAATCATTATTATGTCTTTGTTGT    200

BSNT_02043___    201 ACCCGTTGCAGAAGAGTTAGATGTAAAAAAGGCAGCAAAGGTGACAGGGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12060___yj    201 ACCCGTTGCAGAAGAGTTAGATGTAAAAAAGGCAGCAAAGGTGACAGGGG    250

BSNT_02043___    251 AAAAGAAAATAGAAATGATTGCAATGAAGGAGCTATTAGCGGTAACTGGC    300
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU12060___yj    251 AAAAGAAAATAGAAATGATTGCAATGAAGGAGCTGTTAGCGGTAACTGGC    300

BSNT_02043___    301 TATCTTCGCGGCGGCTGCTCGCCAATTGGCATGAAAAAATTGTTCCCGAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12060___yj    301 TATCTTCGCGGCGGCTGCTCGCCAATTGGCATGAAAAAATTGTTCCCGAC    350

BSNT_02043___    351 CTATATTGATGCATCTGCAGAAGCGCTTGATTTTATTATTGTCAGTGCAG    400
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU12060___yj    351 CTATATTGATGCATCTGCAGAAACGCTTGATTTTATTATTGTCAGTGCAG    400

BSNT_02043___    401 GGAAAATCGGTATGCAGCTAAAGTTGGCGCCACAAGATTTAGCCAGATCA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12060___yj    401 GGAAAATCGGTATGCAGCTAAAGTTGGCGCCACAAGATTTAGCCAGATCA    450

BSNT_02043___    451 TGTGATGCCGCATTTGCAGAAATTGTATAG    480
                     ||||||||||||||||||||||||||||||
BSU12060___yj    451 TGTGATGCCGCATTTGCAGAAATTGTATAG    480


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