Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02032 and BSU11970

See Amino acid alignment / Visit BSNT_02032 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:23
# Commandline: needle
#    -asequence dna-align/BSNT_02032.1.22522.seq
#    -bsequence dna-align/BSU11970___yjcS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02032-BSU11970___yjcS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02032-BSU11970___yjcS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02032
# 2: BSU11970___yjcS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:     276/318 (86.8%)
# Similarity:   276/318 (86.8%)
# Gaps:          36/318 (11.3%)
# Score: 1356.0
# 
#
#=======================================

BSNT_02032         1 ------------------------------------ATGCATTACATAAC     14
                                                         ||||||||||||||
BSU11970___yj      1 ATGAAAAGCCATAAAATGATGGGAGGGGGAATTTCGATGCATTACATAAC     50

BSNT_02032        15 GGCATGTTTAAAAATCATCAGTGATAAAGACCTTAATGAGATAATGAAGG     64
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11970___yj     51 GGCATGTTTAAAAATCATCAGTGATAAAGACCTTAATGAGATAATGAAGG    100

BSNT_02032        65 AATTCAAAAAACTTGAGGAAGAAACGAACAAAGAAGAAGGTTGTATTACA    114
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU11970___yj    101 AATTCAAAAAACTTGAGGAAGAAACGAACAAAGAAGAGGGTTGTATTACA    150

BSNT_02032       115 TTCCATGCTTATCCGCTTGAGCCATCAGAACGTAAAATAATGCTTTGGGA    164
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11970___yj    151 TTCCATGCTTATCCGCTTGAGCCATCAGAACGTAAAATAATGCTTTGGGA    200

BSNT_02032       165 GATTTGGGAAAACGAAGAAGCTGTGAAAACCCATTTCAGGAAAAAACACA    214
                     |||||||||||||||||||||||||||||.||||||||..||||||||||
BSU11970___yj    201 GATTTGGGAAAACGAAGAAGCTGTGAAAATCCATTTCACAAAAAAACACA    250

BSNT_02032       215 CAATAGACGTTCAAAAACAAGAATTAACGGAAGTAGAATGGTTAATGGAA    264
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU11970___yj    251 CAATAGACGTTCAAAAACAAGAATTAACGGAAGTAGAATGGTTAATGAAA    300

BSNT_02032       265 AGCAATGTGAATGATTAA    282
                     ||||||||||||||||.|
BSU11970___yj    301 AGCAATGTGAATGATTGA    318


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