Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02034 and BSU11920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:23
# Commandline: needle
# -asequence dna-align/BSNT_02034___yjcN.1.22522.seq
# -bsequence dna-align/BSU11920___yjcN.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02034___yjcN-BSU11920___yjcN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02034___yjcN-BSU11920___yjcN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02034___yjcN
# 2: BSU11920___yjcN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity: 285/333 (85.6%)
# Similarity: 285/333 (85.6%)
# Gaps: 15/333 ( 4.5%)
# Score: 1282.0
#
#
#=======================================
BSNT_02034___ 1 TTGGAGAAAAAAATGAAAAAGAAAACCTCATTTATACTTTCAATTTTGGC 50
||||||||||||||...|.||||||||||..|.|||||
BSU11920___yj 1 ------------ATGAAAAAGAAAACTAAAATTATACTTTCTCTCTTGGC 38
BSNT_02034___ 51 AGCACTTATAGTTATATTGATTGCACTACCGGTTCTATCTCCTGTTGTTT 100
|||||||||.|||||||||||.|.|||.||.|||||||||||||||||.|
BSU11920___yj 39 AGCACTTATTGTTATATTGATAGTACTTCCAGTTCTATCTCCTGTTGTCT 88
BSNT_02034___ 101 TTACAGGTGCTTCTGAAAAAGGAGCAATCAGACACGAAATTTATAAAAGA 150
||||||.|.||||.||||||||||||||||||||||||||||||||||||
BSU11920___yj 89 TTACAGCTTCTTCGGAAAAAGGAGCAATCAGACACGAAATTTATAAAAGA 138
BSNT_02034___ 151 GGATATCCCTACCAAAGCTACTTTGCAGTACTCCATAA---AGAAGGTGA 197
|||||||||||||||||||||||||||||.|||||.|| ||||||.||
BSU11920___yj 139 GGATATCCCTACCAAAGCTACTTTGCAGTTCTCCAGAAAAGAGAAGGAGA 188
BSNT_02034___ 198 CAATGAATCTGGGAATCTTTATTATGTGAATTGGCTAGATTGGAAAGATA 247
|||||||||||||||||||||||||||.|||||||||||||||||||||.
BSU11920___yj 189 CAATGAATCTGGGAATCTTTATTATGTAAATTGGCTAGATTGGAAAGATG 238
BSNT_02034___ 248 AAACTGGACAAACGCCTCACTTATGCTATTCAAAAAAATCATCAGATGGT 297
||||.||.|||||.|||||||||||||||||.||||||||||||||||||
BSU11920___yj 239 AAACAGGGCAAACTCCTCACTTATGCTATTCGAAAAAATCATCAGATGGT 288
BSNT_02034___ 298 AAATACAAAGTAGACTGTGGAACCGGGGCGTAA 330
.|||||.|||||...|||||.||.|||.|||||
BSU11920___yj 289 GAATACGAAGTAAGTTGTGGCACAGGGCCGTAA 321
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