Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01985 and BSU11890

See Amino acid alignment / Visit BSNT_01985 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:22
# Commandline: needle
#    -asequence dna-align/BSNT_01985___yjcK.1.22522.seq
#    -bsequence dna-align/BSU11890___yjcK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01985___yjcK-BSU11890___yjcK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01985___yjcK-BSU11890___yjcK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01985___yjcK
# 2: BSU11890___yjcK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 546
# Identity:     536/546 (98.2%)
# Similarity:   536/546 (98.2%)
# Gaps:           0/546 ( 0.0%)
# Score: 2640.0
# 
#
#=======================================

BSNT_01985___      1 ATGTTAAAAGGAAAAACCATTTATGTTAGACCTTTAGAAGTAACGGATGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11890___yj      1 ATGTTAAAAGGAAAAACCATTTATGTTAGACCTTTAGAAGTAACGGATGC     50

BSNT_01985___     51 CGAAGAAAATTTGCGGCTGCAAAGCGAAAATCGGGATTTTTTCGAACAAT    100
                     ||||||||||.||.|||||||||||||||||||.||||||||||||||.|
BSU11890___yj     51 CGAAGAAAATCTGGGGCTGCAAAGCGAAAATCGAGATTTTTTCGAACAGT    100

BSNT_01985___    101 TTTCTATGATACGCACAGACGATTACTATACGGTTGAGGGGCAAAGAAAA    150
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU11890___yj    101 TTTCTATGATACGCGCAGACGATTACTATACGGTTGAGGGGCAAAGAAAA    150

BSNT_01985___    151 CGAATAACCGAGTATCAGGAAAGACTTGAGAAAGATGAAGAATATCATTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11890___yj    151 CGAATAACCGAGTATCAGGAAAGACTTGAGAAAGATGAAGAATATCATTT    200

BSNT_01985___    201 TGGCATCTTTACAGCGTCAGACGATAGATTAATCGGGACGGTTTCGCTCT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11890___yj    201 TGGCATCTTTACAGCGTCAGACGATAGATTAATCGGGACGGTTTCGCTCT    250

BSNT_01985___    251 TTCAAATCATCCGTGGAGCGCTGCAAACTGCGTTCATTGGGTATTTTTTA    300
                     ||||||||||||||||.||||||||||||||||||||.||||||||||||
BSU11890___yj    251 TTCAAATCATCCGTGGCGCGCTGCAAACTGCGTTCATCGGGTATTTTTTA    300

BSNT_01985___    301 GACAAAGCCCATAATGGAAAGGATATTATGACAGAGGCAGTCAGATTGGT    350
                     ||||||||||||||||||||||..||||||||||||||||||||||||||
BSU11890___yj    301 GACAAAGCCCATAATGGAAAGGGCATTATGACAGAGGCAGTCAGATTGGT    350

BSNT_01985___    351 TGTTGATTATGCGTTCCACGAATTGAAACTGCATCGGATTGAAGCCGGTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11890___yj    351 TGTTGATTATGCGTTCCACGAATTGAAACTGCATCGGATTGAAGCCGGTG    400

BSNT_01985___    401 TGATGCCCCGTAATCTCGGGTCCATGCGTGTTTTAGAAAAAGCGGGATTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11890___yj    401 TGATGCCCCGTAATCTCGGGTCCATGCGTGTTTTAGAAAAAGCGGGATTT    450

BSNT_01985___    451 CATAAAGAAGGCATCGCCCGAAAAAATGTAAAAATTAATGGCGTTTGGGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11890___yj    451 CATAAAGAAGGCATCGCCCGAAAAAATGTAAAAATTAATGGCGTTTGGGA    500

BSNT_01985___    501 GGATCATCAAGTCCTTGCGATTCTGAATCCTGATGACGAACAATAA    546
                     |||||||||||||||.||||||||||||||||||||||||||||||
BSU11890___yj    501 GGATCATCAAGTCCTCGCGATTCTGAATCCTGATGACGAACAATAA    546


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