Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01982 and BSU11880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:22
# Commandline: needle
# -asequence dna-align/BSNT_01982___yjcJ.1.22522.seq
# -bsequence dna-align/BSU11880___yjcJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01982___yjcJ-BSU11880___yjcJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01982___yjcJ-BSU11880___yjcJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01982___yjcJ
# 2: BSU11880___yjcJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1173
# Identity: 1158/1173 (98.7%)
# Similarity: 1158/1173 (98.7%)
# Gaps: 0/1173 ( 0.0%)
# Score: 5730.0
#
#
#=======================================
BSNT_01982___ 1 TTGAGTAAACACAATTGGACGCTGGAAACCCAGCTCGTGCACAATCCATT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 1 TTGAGTAAACACAATTGGACGCTGGAAACCCAGCTCGTGCACAATCCATT 50
BSNT_01982___ 51 TAAAACAGACGGCGGAACCGGGGCGGTCAGTGTACCGATTCAGCACGCCT 100
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU11880___yj 51 TAAAACAGACGGCGGAACCGGGGCAGTCAGTGTACCGATTCAGCACGCCT 100
BSNT_01982___ 101 CGACTTTTCACCAATCTTCATTTGAAGAGTTCGGGGCATATGATTACAGC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 101 CGACTTTTCACCAATCTTCATTTGAAGAGTTCGGGGCATATGATTACAGC 150
BSNT_01982___ 151 CGCTCTGGCACGCCGACAAGAACAGCTCTCGAAGAAACAATTGCCGCACT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 151 CGCTCTGGCACGCCGACAAGAACAGCTCTCGAAGAAACAATTGCCGCACT 200
BSNT_01982___ 201 GGAAGGCGGAACAAGAGGATTTGCTTTCAGTTCAGGCATGGCTGCCATCT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 201 GGAAGGCGGAACAAGAGGATTTGCTTTCAGTTCAGGCATGGCTGCCATCT 250
BSNT_01982___ 251 CAACAGCATTTTTACTGCTGTCACAGGGTGATCACGTTCTTGTGACAGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 251 CAACAGCATTTTTACTGCTGTCACAGGGTGATCACGTTCTTGTGACAGAA 300
BSNT_01982___ 301 GATGTATACGGCGGAACCTTCCGTATGGTGACAGAGGTGCTGACCCGGTT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 301 GATGTATACGGCGGAACCTTCCGTATGGTGACAGAGGTGCTGACCCGGTT 350
BSNT_01982___ 351 TGGCATTGAGCATACGTTTGTCGACATGACGGATCGTAATGAAGTGGCGC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 351 TGGCATTGAGCATACGTTTGTCGACATGACGGATCGTAATGAAGTGGCGC 400
BSNT_01982___ 401 GGAGCATCAAGCCGAATACAAAGGTCATTTATATGGAGACGCCATCAAAT 450
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU11880___yj 401 GGAGCATCAAGCCGAACACAAAGGTCATTTATATGGAGACGCCATCAAAT 450
BSNT_01982___ 451 CCGACACTTGGGATTACGGATATTAAAGCGATTGTTCAGCTTGCAAAAGA 500
|||||||||||||||||||||||||||||..|||||||||||||||||||
BSU11880___yj 451 CCGACACTTGGGATTACGGATATTAAAGCAGTTGTTCAGCTTGCAAAAGA 500
BSNT_01982___ 501 AAACGGCTGTCTGACCTTTCTGGACAATACATTCATGACACCGGCACTGC 550
|||||||||.|||||||||||||||||||||||||||||.||||||||||
BSU11880___yj 501 AAACGGCTGCCTGACCTTTCTGGACAATACATTCATGACGCCGGCACTGC 550
BSNT_01982___ 551 AGCGTCCGCTTGACCTCGGCGTGGATATTGTACTTCACAGCGCGACAAAA 600
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU11880___yj 551 AGCGTCCGCTTGATCTCGGCGTGGATATTGTACTTCACAGCGCGACAAAA 600
BSNT_01982___ 601 TTCTTAAGCGGACACAGCGATGTGCTCTCAGGTTTGGCTGCTGTCAAAGA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 601 TTCTTAAGCGGACACAGCGATGTGCTCTCAGGTTTGGCTGCTGTCAAAGA 650
BSNT_01982___ 651 TGAAGAGCTTGGGAAGCAGCTGTATAAGCTGCAAAACGCGTTCGGCGCCG 700
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU11880___yj 651 TGAAGAGCTTGGGAAGCAGCTGTATAAGCTACAAAACGCGTTCGGCGCCG 700
BSNT_01982___ 701 TCCTTGGCGTACAGGATTGCTGGCTTGTCCTGCGCGGATTAAAAACATTG 750
||||||||||.||.||||||||||||||||||||||||||||||||||||
BSU11880___yj 701 TCCTTGGCGTGCAAGATTGCTGGCTTGTCCTGCGCGGATTAAAAACATTG 750
BSNT_01982___ 751 CAGGTCCGTTTAGAGAAGGCGAGTCAAACAGCCCAGCGGCTTGCGGAATT 800
|||||||||||||||||.||||||||||||||.|||||||||||||||||
BSU11880___yj 751 CAGGTCCGTTTAGAGAAAGCGAGTCAAACAGCTCAGCGGCTTGCGGAATT 800
BSNT_01982___ 801 TTTCCAGAAGCATCCGGCGGTGAAGCGCGTGTATTATCCGGGACTGGCTG 850
||||||||||||.||||||||.||||||||||||||||||||||||||||
BSU11880___yj 801 TTTCCAGAAGCACCCGGCGGTCAAGCGCGTGTATTATCCGGGACTGGCTG 850
BSNT_01982___ 851 ATCATCCCGGCGCTGAAACCCATAAAAGCCAGTCAACGGGAGCGGGCGCC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 851 ATCATCCCGGCGCTGAAACCCATAAAAGCCAGTCAACGGGAGCGGGCGCC 900
BSNT_01982___ 901 GTGCTATCTTTTGAGCTTGAAAGCAAAGAGGCCGTTAAGAAGTTAGTCGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 901 GTGCTATCTTTTGAGCTTGAAAGCAAAGAGGCCGTTAAGAAGTTAGTCGA 950
BSNT_01982___ 951 GAATGTGTCACTCCCAGTCTTCGCTGTCAGCCTTGGCGCCGTGGAATCGA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 951 GAATGTGTCACTCCCAGTCTTCGCTGTCAGCCTTGGCGCCGTGGAATCGA 1000
BSNT_01982___ 1001 TTTTGTCCTATCCGGCAACGATGTCTCATGCGGCAATGCCTAAGGAAGAG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 1001 TTTTGTCCTATCCGGCAACGATGTCTCATGCGGCAATGCCTAAGGAAGAG 1050
BSNT_01982___ 1051 CGTGAAAAACGCGGTATCACTGATGGCCTGCTCCGTCTGAGTGTCGGCGT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 1051 CGTGAAAAACGCGGTATCACTGATGGCCTGCTCCGTCTGAGTGTCGGCGT 1100
BSNT_01982___ 1101 CGAACATGCAGACGATTTAGAACACGATTTCGAACAAGCGCTGAAAGAAA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj 1101 CGAACATGCAGACGATTTAGAACACGATTTCGAACAAGCGCTGAAAGAAA 1150
BSNT_01982___ 1151 TTGCTCCAGTTGCGGTTCGTTAA 1173
|||||||||||.|||||||||||
BSU11880___yj 1151 TTGCTCCAGTTTCGGTTCGTTAA 1173
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