Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01982 and BSU11880

See Amino acid alignment / Visit BSNT_01982 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:22
# Commandline: needle
#    -asequence dna-align/BSNT_01982___yjcJ.1.22522.seq
#    -bsequence dna-align/BSU11880___yjcJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01982___yjcJ-BSU11880___yjcJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01982___yjcJ-BSU11880___yjcJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01982___yjcJ
# 2: BSU11880___yjcJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1173
# Identity:    1158/1173 (98.7%)
# Similarity:  1158/1173 (98.7%)
# Gaps:           0/1173 ( 0.0%)
# Score: 5730.0
# 
#
#=======================================

BSNT_01982___      1 TTGAGTAAACACAATTGGACGCTGGAAACCCAGCTCGTGCACAATCCATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj      1 TTGAGTAAACACAATTGGACGCTGGAAACCCAGCTCGTGCACAATCCATT     50

BSNT_01982___     51 TAAAACAGACGGCGGAACCGGGGCGGTCAGTGTACCGATTCAGCACGCCT    100
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU11880___yj     51 TAAAACAGACGGCGGAACCGGGGCAGTCAGTGTACCGATTCAGCACGCCT    100

BSNT_01982___    101 CGACTTTTCACCAATCTTCATTTGAAGAGTTCGGGGCATATGATTACAGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj    101 CGACTTTTCACCAATCTTCATTTGAAGAGTTCGGGGCATATGATTACAGC    150

BSNT_01982___    151 CGCTCTGGCACGCCGACAAGAACAGCTCTCGAAGAAACAATTGCCGCACT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj    151 CGCTCTGGCACGCCGACAAGAACAGCTCTCGAAGAAACAATTGCCGCACT    200

BSNT_01982___    201 GGAAGGCGGAACAAGAGGATTTGCTTTCAGTTCAGGCATGGCTGCCATCT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj    201 GGAAGGCGGAACAAGAGGATTTGCTTTCAGTTCAGGCATGGCTGCCATCT    250

BSNT_01982___    251 CAACAGCATTTTTACTGCTGTCACAGGGTGATCACGTTCTTGTGACAGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj    251 CAACAGCATTTTTACTGCTGTCACAGGGTGATCACGTTCTTGTGACAGAA    300

BSNT_01982___    301 GATGTATACGGCGGAACCTTCCGTATGGTGACAGAGGTGCTGACCCGGTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj    301 GATGTATACGGCGGAACCTTCCGTATGGTGACAGAGGTGCTGACCCGGTT    350

BSNT_01982___    351 TGGCATTGAGCATACGTTTGTCGACATGACGGATCGTAATGAAGTGGCGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj    351 TGGCATTGAGCATACGTTTGTCGACATGACGGATCGTAATGAAGTGGCGC    400

BSNT_01982___    401 GGAGCATCAAGCCGAATACAAAGGTCATTTATATGGAGACGCCATCAAAT    450
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU11880___yj    401 GGAGCATCAAGCCGAACACAAAGGTCATTTATATGGAGACGCCATCAAAT    450

BSNT_01982___    451 CCGACACTTGGGATTACGGATATTAAAGCGATTGTTCAGCTTGCAAAAGA    500
                     |||||||||||||||||||||||||||||..|||||||||||||||||||
BSU11880___yj    451 CCGACACTTGGGATTACGGATATTAAAGCAGTTGTTCAGCTTGCAAAAGA    500

BSNT_01982___    501 AAACGGCTGTCTGACCTTTCTGGACAATACATTCATGACACCGGCACTGC    550
                     |||||||||.|||||||||||||||||||||||||||||.||||||||||
BSU11880___yj    501 AAACGGCTGCCTGACCTTTCTGGACAATACATTCATGACGCCGGCACTGC    550

BSNT_01982___    551 AGCGTCCGCTTGACCTCGGCGTGGATATTGTACTTCACAGCGCGACAAAA    600
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU11880___yj    551 AGCGTCCGCTTGATCTCGGCGTGGATATTGTACTTCACAGCGCGACAAAA    600

BSNT_01982___    601 TTCTTAAGCGGACACAGCGATGTGCTCTCAGGTTTGGCTGCTGTCAAAGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj    601 TTCTTAAGCGGACACAGCGATGTGCTCTCAGGTTTGGCTGCTGTCAAAGA    650

BSNT_01982___    651 TGAAGAGCTTGGGAAGCAGCTGTATAAGCTGCAAAACGCGTTCGGCGCCG    700
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU11880___yj    651 TGAAGAGCTTGGGAAGCAGCTGTATAAGCTACAAAACGCGTTCGGCGCCG    700

BSNT_01982___    701 TCCTTGGCGTACAGGATTGCTGGCTTGTCCTGCGCGGATTAAAAACATTG    750
                     ||||||||||.||.||||||||||||||||||||||||||||||||||||
BSU11880___yj    701 TCCTTGGCGTGCAAGATTGCTGGCTTGTCCTGCGCGGATTAAAAACATTG    750

BSNT_01982___    751 CAGGTCCGTTTAGAGAAGGCGAGTCAAACAGCCCAGCGGCTTGCGGAATT    800
                     |||||||||||||||||.||||||||||||||.|||||||||||||||||
BSU11880___yj    751 CAGGTCCGTTTAGAGAAAGCGAGTCAAACAGCTCAGCGGCTTGCGGAATT    800

BSNT_01982___    801 TTTCCAGAAGCATCCGGCGGTGAAGCGCGTGTATTATCCGGGACTGGCTG    850
                     ||||||||||||.||||||||.||||||||||||||||||||||||||||
BSU11880___yj    801 TTTCCAGAAGCACCCGGCGGTCAAGCGCGTGTATTATCCGGGACTGGCTG    850

BSNT_01982___    851 ATCATCCCGGCGCTGAAACCCATAAAAGCCAGTCAACGGGAGCGGGCGCC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj    851 ATCATCCCGGCGCTGAAACCCATAAAAGCCAGTCAACGGGAGCGGGCGCC    900

BSNT_01982___    901 GTGCTATCTTTTGAGCTTGAAAGCAAAGAGGCCGTTAAGAAGTTAGTCGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj    901 GTGCTATCTTTTGAGCTTGAAAGCAAAGAGGCCGTTAAGAAGTTAGTCGA    950

BSNT_01982___    951 GAATGTGTCACTCCCAGTCTTCGCTGTCAGCCTTGGCGCCGTGGAATCGA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj    951 GAATGTGTCACTCCCAGTCTTCGCTGTCAGCCTTGGCGCCGTGGAATCGA   1000

BSNT_01982___   1001 TTTTGTCCTATCCGGCAACGATGTCTCATGCGGCAATGCCTAAGGAAGAG   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj   1001 TTTTGTCCTATCCGGCAACGATGTCTCATGCGGCAATGCCTAAGGAAGAG   1050

BSNT_01982___   1051 CGTGAAAAACGCGGTATCACTGATGGCCTGCTCCGTCTGAGTGTCGGCGT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj   1051 CGTGAAAAACGCGGTATCACTGATGGCCTGCTCCGTCTGAGTGTCGGCGT   1100

BSNT_01982___   1101 CGAACATGCAGACGATTTAGAACACGATTTCGAACAAGCGCTGAAAGAAA   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11880___yj   1101 CGAACATGCAGACGATTTAGAACACGATTTCGAACAAGCGCTGAAAGAAA   1150

BSNT_01982___   1151 TTGCTCCAGTTGCGGTTCGTTAA   1173
                     |||||||||||.|||||||||||
BSU11880___yj   1151 TTGCTCCAGTTTCGGTTCGTTAA   1173


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