Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01975 and BSU11820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:21
# Commandline: needle
# -asequence dna-align/BSNT_01975___yjcD.1.22522.seq
# -bsequence dna-align/BSU11820___yjcD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01975___yjcD-BSU11820___yjcD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01975___yjcD-BSU11820___yjcD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01975___yjcD
# 2: BSU11820___yjcD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2280
# Identity: 2133/2280 (93.6%)
# Similarity: 2133/2280 (93.6%)
# Gaps: 126/2280 ( 5.5%)
# Score: 10581.0
#
#
#=======================================
BSNT_01975___ 1 TTGAAATGCGCCCGACTGAATGATAGAATCATACATTTACATACATATTC 50
BSU11820___yj 0 -------------------------------------------------- 0
BSNT_01975___ 51 GAGAGAACATTATCAATTCCTCTTTGAAGAGGGAATAAAAGGACATTTAT 100
BSU11820___yj 0 -------------------------------------------------- 0
BSNT_01975___ 101 TTTGTTCTCATTGCGGAAAGCCCGTTTTGTTACGGCTTAACATCGCCGAT 150
||||||||||||||||||||||||
BSU11820___yj 1 --------------------------TTGTTACGGCTTAACATCGCCGAT 24
BSNT_01975___ 151 CCGCCAGAGTTTATCCATCGCCAGCCAGGCGATTTTCCGGCATGTGAGGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 25 CCGCCAGAGTTTATCCATCGCCAGCCAGGCGATTTTCCGGCATGTGAGGA 74
BSNT_01975___ 201 GGCGTGCGAACCGAAGCCCTCTAAAGAGGAAAAAAAAGAAGACGATCAGG 250
|||||||||||||||||||||||||||||..|||||||||||.|||||||
BSU11820___yj 75 GGCGTGCGAACCGAAGCCCTCTAAAGAGGGGAAAAAAGAAGATGATCAGG 124
BSNT_01975___ 251 AATCTGGTGTCATTCGTTTACCCAAGGGAAAAGCGATCGCCGCTGACCCG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 125 AATCTGGTGTCATTCGTTTACCCAAGGGAAAAGCGATCGCCGCTGACCCG 174
BSNT_01975___ 301 TCCCCAGCTGTTACGGAATGGCACCGTCCTAGAAGCATTAAACCAGGAAC 350
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU11820___yj 175 TCCCCAGCTGTTACAGAATGGCACCGTCCTAGAAGCATTAAACCAGGAAC 224
BSNT_01975___ 351 ACCATTTGTGCCAAAAACAATAGAACCCGATACGAGCCTTTTTCCGTCTG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 225 ACCATTTGTGCCAAAAACAATAGAACCCGATACGAGCCTTTTTCCGTCTG 274
BSNT_01975___ 401 TCGGTTTAAACACGGATCAGCTGAAAGCTGTCACGGAAACAGAGGGCCCG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 275 TCGGTTTAAACACGGATCAGCTGAAAGCTGTCACGGAAACAGAGGGCCCG 324
BSNT_01975___ 451 CTGCTCGTGCTTGCAGGTGCGGGGAGCGGAAAAACACGGGTGCTGACAGC 500
||.||||||||||||||||||||||||||||||||||||||.||||||||
BSU11820___yj 325 CTCCTCGTGCTTGCAGGTGCGGGGAGCGGAAAAACACGGGTACTGACAGC 374
BSNT_01975___ 501 CCGTGCCGCCCACATGATCGAACACTTAGGCATACCGCCTGAAAATATGC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 375 CCGTGCCGCCCACATGATCGAACACTTAGGCATACCGCCTGAAAATATGC 424
BSNT_01975___ 551 TGCTTGTCACCTTTACAACAAAAGCTGTCGCTGAAATGAAAGAGCGTATG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 425 TGCTTGTCACCTTTACAACAAAAGCTGTCGCTGAAATGAAAGAGCGTATG 474
BSNT_01975___ 601 GCCAACCAGTACGGATTACAGCCGGCAAAAGTCAGAAGACTTGTGACAGG 650
||.||||||||||||||||||||||||||||||||||||.||||||||||
BSU11820___yj 475 GCGAACCAGTACGGATTACAGCCGGCAAAAGTCAGAAGAATTGTGACAGG 524
BSNT_01975___ 651 AACATTCCACAGTCTGTTTTATAAGATCTTGTATCACTCTAATTCTGCTA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 525 AACATTCCACAGTCTGTTTTATAAGATCTTGTATCACTCTAATTCTGCTA 574
BSNT_01975___ 701 AATGGAACGGTGAGCATCTGCTGAAAATGGAGTGGCAGCGGGAACAATAT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 575 AATGGAACGGTGAGCATCTGCTGAAAATGGAGTGGCAGCGGGAACAATAT 624
BSNT_01975___ 751 ATCAAAAAAGCACTCTATGAAGAAGGCATCGATGAGAAAGAATTCCCAGT 800
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU11820___yj 625 ATCAAAAAAGCACTCTATGAAGAAGGCATCGATGAGAAAGAATCCCCAGT 674
BSNT_01975___ 801 TGACCAAGCTCTGCAGCAGATCGGTTTTTGGAAAAACACTTATGTCCCAA 850
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 675 TGACCAAGCCCTGCAGCAGATCGGTTTTTGGAAAAACACTTATGTCCCAA 724
BSNT_01975___ 851 ATGAACGCATCCCTCTAAAAGATGAGTGGGAAAAACAAGTTTATCGTTTA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 725 ATGAACGCATCCCTCTAAAAGATGAGTGGGAAAAACAAGTTTATCGTTTA 774
BSNT_01975___ 901 TATGAACATTATGAACGCCAGAAAAAAGAACACAGCCAATTTGATTTTGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 775 TATGAACATTATGAACGCCAGAAAAAAGAACACAGCCAATTTGATTTTGA 824
BSNT_01975___ 951 TGACATGGCTTCAGCCTGCTATGAATTGTTTATCGAGCGGCCTGACCTTC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 825 TGACATGGCTTCAGCCTGCTATGAATTGTTTATCGAGCGGCCTGACCTTC 874
BSNT_01975___ 1001 TGGAACAATATCAATCTCGGTTTACGTATATCTTAATTGATGAGTTTCAG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 875 TGGAACAATATCAATCTCGGTTTACGTATATCTTAATTGATGAGTTTCAG 924
BSNT_01975___ 1051 GACATTAATCCGGTTCAATACAAAATCATGCAAATGCTCGCCAGCCCGGA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 925 GACATTAATCCGGTTCAATACAAAATCATGCAAATGCTCGCCAGCCCGGA 974
BSNT_01975___ 1101 GCAAAACCTGTGCTGTGTCGGAGACGATGACCAGTCCATCTACGCGTTTC 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 975 GCAAAACCTGTGCTGTGTCGGAGACGATGACCAGTCCATCTACGCGTTTC 1024
BSNT_01975___ 1151 GCGGAAGCAATCCGTCTTTCATTCTTGATTTTCAAAAGGATTATCCGGGA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1025 GCGGAAGCAATCCGTCTTTCATTCTTGATTTTCAAAAGGATTATCCGGGA 1074
BSNT_01975___ 1201 GCGAAGACGATCTATTTAACTGCGAACTACAGGTCTACGCACCCGATCGT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1075 GCGAAGACGATCTATTTAACTGCGAACTACAGGTCTACGCACCCGATCGT 1124
BSNT_01975___ 1251 CTCTAGTGCTGATATCGTTGTGAAAAAGAACAAAAACAGATATGCCAAAA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1125 CTCTAGTGCTGATATCGTTGTGAAAAAGAACAAAAACAGATATGCCAAAA 1174
BSNT_01975___ 1301 CGCTTGAAGCGGCCCGCGATGACATTCAGGTCCCTGTGCTGTTTTATCCT 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1175 CGCTTGAAGCGGCCCGCGATGACATTCAGGTCCCTGTGCTGTTTTATCCT 1224
BSNT_01975___ 1351 TATGATGAAGAGGAAGAAGCCACAATGGTCGTTTCCGATATCAAAGAAAA 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1225 TATGATGAAGAGGAAGAAGCCACAATGGTCGTTTCCGATATCAAAGAAAA 1274
BSNT_01975___ 1401 AATTCAAAATGGAGCCAGTCCAGAAGACTTTGCGGTTCTTTACCGCACAA 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1275 AATTCAAAATGGAGCCAGTCCAGAAGACTTTGCGGTTCTTTACCGCACAA 1324
BSNT_01975___ 1451 ACAGCGGAGGCCGTGCTATATATGAAAGGCTTCATCAATCGTCAATTCCG 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1325 ACAGCGGAGGCCGTGCTATATATGAAAGGCTTCATCAATCGTCAATTCCG 1374
BSNT_01975___ 1501 TATACAGCTGACCGCGGCGTCCAATCGTTTTACAGCAGACGGATCGTCCG 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1375 TATACAGCTGACCGCGGCGTCCAATCGTTTTACAGCAGACGGATCGTCCG 1424
BSNT_01975___ 1551 CCAGATTCTCGCCTACTTGTACGCCAGCCAAAATGAGGATGATACCGAAG 1600
||||||||||||||||||||||||||||||||||||||||||.|||||.|
BSU11820___yj 1425 CCAGATTCTCGCCTACTTGTACGCCAGCCAAAATGAGGATGACACCGAGG 1474
BSNT_01975___ 1601 CGATTAAACACTTGCTTCCCGCCTTGTTTTTAAAACAGTCCGCTTTGAAT 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1475 CGATTAAACACTTGCTTCCCGCCTTGTTTTTAAAACAGTCCGCTTTGAAT 1524
BSNT_01975___ 1651 ACGCTGAAGGCGCTCTCGATCACAGAGGACTGTACCATGATCAAAGCGCT 1700
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU11820___yj 1525 ACGCTGAAGGCGCTCTCGATTACAGAGGACTGTACCATGATCAAAGCGCT 1574
BSNT_01975___ 1701 GGCCAAATTGCCTGATCTGAAGCCATTCCAGCTGGACAAAATCAAGAAAA 1750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1575 GGCCAAATTGCCTGATCTGAAGCCATTCCAGCTGGACAAAATCAAGAAAA 1624
BSNT_01975___ 1751 TCGTACCGTTTTTTGCAAGCCTCCGCACGATGAAGCCCGTAGAAGCCATC 1800
||||||||||||||||||||||||||||.|||||.|||||||||||||||
BSU11820___yj 1625 TCGTACCGTTTTTTGCAAGCCTCCGCACAATGAAACCCGTAGAAGCCATC 1674
BSNT_01975___ 1801 ACCTTTGCAGAAGGAAAAATGGGCTTCTCCGAGTATTTAAAAAAGCGGGG 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1675 ACCTTTGCAGAAGGAAAAATGGGCTTCTCCGAGTATTTAAAAAAGCGGGG 1724
BSNT_01975___ 1851 CAATGAGGGCAACAAGCTGGAAAAAGGTTCCGATGACCTGCGCGATATCA 1900
|||||||||||||||||||||||||||.||.||||||||||||||.||||
BSU11820___yj 1725 CAATGAGGGCAACAAGCTGGAAAAAGGCTCTGATGACCTGCGCGACATCA 1774
BSNT_01975___ 1901 AGGTTGTCGCCAAGAAGTTCAAAACGATTCCTGACTTTCTTGCCCACGTA 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1775 AGGTTGTCGCCAAGAAGTTCAAAACGATTCCTGACTTTCTTGCCCACGTA 1824
BSNT_01975___ 1951 GACCATATGAGGGCCGCTGAGAAAAACAGAACGGATGAACATGGCGTTCA 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1825 GACCATATGAGGGCCGCTGAGAAAAACAGAACGGATGAACATGGCGTTCA 1874
BSNT_01975___ 2001 GCTGATGACCATTCACCGGTCAAAAGGCCTTGAATTCAAAACAGTCTACG 2050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1875 GCTGATGACCATTCACCGGTCAAAAGGCCTTGAATTCAAAACAGTCTACG 1924
BSNT_01975___ 2051 TGTTAGGCACTGTAGACGGTTCGATTCCGCACGATTTCTCATTAGAAACG 2100
||||||||||||||||.||.||||||||||||||||||||||||||||||
BSU11820___yj 1925 TGTTAGGCACTGTAGATGGCTCGATTCCGCACGATTTCTCATTAGAAACG 1974
BSNT_01975___ 2101 GCAAGAAAAGGAGACGAGGCCGCTCTTGAGGAGGAAAGACGCCTTTTATA 2150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 1975 GCAAGAAAAGGAGACGAGGCCGCTCTTGAGGAGGAAAGACGCCTTTTATA 2024
BSNT_01975___ 2151 TGTAGCCATGACCCGGGCGAAACAGCATTTATATTTGTCTTGCCCCGCTA 2200
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU11820___yj 2025 TGTAGCCATGACCCGGGCGAAACAGCATTTATATTTGTCTTGCCCTGCTA 2074
BSNT_01975___ 2201 ACAGGCGCGGCAAAACAGCCAACCGCTCAAGATTTTTGTATCCCCTGCTA 2250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11820___yj 2075 ACAGGCGCGGCAAAACAGCCAACCGCTCAAGATTTTTGTATCCCCTGCTA 2124
BSNT_01975___ 2251 CAGAAAGCAAGACAGCCCTTGCATCATTAA 2280
||||||||||||||||||||||||||||||
BSU11820___yj 2125 CAGAAAGCAAGACAGCCCTTGCATCATTAA 2154
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