Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01964 and BSU11760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:20
# Commandline: needle
# -asequence dna-align/BSNT_01964___cotX.1.22522.seq
# -bsequence dna-align/BSU11760___cotX.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01964___cotX-BSU11760___cotX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01964___cotX-BSU11760___cotX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01964___cotX
# 2: BSU11760___cotX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 564
# Identity: 329/564 (58.3%)
# Similarity: 329/564 (58.3%)
# Gaps: 126/564 (22.3%)
# Score: 851.5
#
#
#=======================================
BSNT_01964___ 1 ATGGAATCAAGACCTTACTCATGGGTTGCCCTAGATAATTCATGT-ACAC 49
||||||...|||||.||.||.||||||||.||.|||..|...||| || |
BSU11760___co 1 ATGGAAAGCAGACCATATTCTTGGGTTGCACTTGATCCTGACTGTGAC-C 49
BSNT_01964___ 50 ACCCG---GGT-----AGCG---GCTATA----------AAAGAGAAGCG 78
|.||| |.| ||.| |.||.| |||||.||
BSU11760___co 50 ATCCGTTAGATGACAAAGAGAAAGATAAAGAAAAACACGAAAGAAAA--- 96
BSNT_01964___ 79 GTTTGTCAT---GACGTTTGTTCTGGAGGAGAAGATGCT----------- 114
|||||| |||||||| |||.|...|.| |||.|
BSU11760___co 97 ---TGTCATTGCGACGTTTG--CTGTAATGGCA-ATGGTTTTTTTGGCAA 140
BSNT_01964___ 115 ----AACGCATT------TCAAGATTTTGATCAGCT-AAGC----CTTAA 149
|||||.|| .||||||.| |||| |||| ||.||
BSU11760___co 141 CGACAACGCCTTCATCGACCAAGATCT-----AGCTCAAGCAAATCTCAA 185
BSNT_01964___ 150 CAAACAAACATCTGAAGAAATGATTATCGTTAGAGATTCTTGCGACATTG 199
|||||||...||.||.||||.||||||..|||||||||||||.|||||..
BSU11760___co 186 CAAACAAGTTTCAGATGAAACGATTATTATTAGAGATTCTTGTGACATCA 235
BSNT_01964___ 200 ATGTTACGTCTACTGACACTCAAGTTGCTGCATCCATTCAAGCCGCCCTC 249
|||||||.|||||.|||..|||||..|...||||..||..|.|.||.||.
BSU11760___co 236 ATGTTACATCTACAGACGTTCAAGCCGTAACATCAGTTGTAACAGCACTT 285
BSNT_01964___ 250 CAAACTGCTGTCATTACAATTGTAAACT----TATCAATAGCAGACG--G 293
.|..|.||||||.|.|| |..|||| .||||||.||||||| |
BSU11760___co 286 AATGCCGCTGTCGTAAC----GGCAACTCTGACATCAATTGCAGACGGCG 331
BSNT_01964___ 294 TGATTTAGCAGATCAAGTCATCCAAGACTTAGTGCA----ACAATCTGTT 339
|.||| ||.||...||||...|||||.||..|.|| ||| |.|
BSU11760___co 332 TAATT--GCCGAATTAGTCGCACAAGATTTGTTACAGCTTACA----GCT 375
BSNT_01964___ 340 AACAAGC-AGTCAAACCGTCAAAAACTAGTGATTGAAAACTCTAGAAATG 388
|||||.| ||| ||||||.||||||||..|.||.| ||||
BSU11760___co 376 AACAAACAAGT-AAACCGCCAAAAACTTCTCATCG-----------AATG 413
BSNT_01964___ 389 TT-----------AATGTCACAACAACCGATACAGATATTGCA----CTA 423
|| ||.|||||||||...|||.|.|||||.||| .||
BSU11760___co 414 TTCCCGCGGCGTAAACGTCACAACAGTAGATGCCGATATCGCAACCCTTA 463
BSNT_01964___ 424 TCGATCCA-AACACTGACACAGACACTTGCCGCTA---CAATTATCGCAG 469
| .||.| |.|| |||.|.|||||.|..||.| .|.|||||.|..
BSU11760___co 464 T--TTCTACAGCA---ACAAATACACTCGTAGCCATCCTAGTTATCACTC 508
BSNT_01964___ 470 TTGGAATCCTCTAA 483
||| |||||||.
BSU11760___co 509 TTG---TCCTCTAG 519
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