Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01959 and BSU11730

See Amino acid alignment / Visit BSNT_01959 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:20
# Commandline: needle
#    -asequence dna-align/BSNT_01959___yjbX.1.22522.seq
#    -bsequence dna-align/BSU11730___cotO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01959___yjbX-BSU11730___cotO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01959___yjbX-BSU11730___cotO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01959___yjbX
# 2: BSU11730___cotO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 684
# Identity:     669/684 (97.8%)
# Similarity:   669/684 (97.8%)
# Gaps:           6/684 ( 0.9%)
# Score: 3309.0
# 
#
#=======================================

BSNT_01959___      1 ------ATGTCTAATAAGAAAAGAAACGCGGATAAAAAACCGCTCATGTA     44
                           ||||||||||||||||||||||||||||||||||||||||||||
BSU11730___co      1 ATGAAGATGTCTAATAAGAAAAGAAACGCGGATAAAAAACCGCTCATGTA     50

BSNT_01959___     45 TATTGTTCAGCCGGATTATGCAGAAACTACAAGGTCATCCATGCAGGAGA     94
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11730___co     51 TATTGTTCAGCCGGATTATGCAGAAACTACAAGGTCATCCATGCAGGAGA    100

BSNT_01959___     95 TTGTCATCAAAAGAAAGGCCGACAAACCCGCTCCGCCAAAAGCTGAGGAA    144
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11730___co    101 TTGTCATCAAAAGAAAGGCCGACAAACCCGCTCCGCCAAAAGCTGAGGAA    150

BSNT_01959___    145 AAGCCGGCTTACCATGAGAAGGAGCAGGAGGAAGCTGTGGCACAGGATGT    194
                     |||||||||||||||||||||.|||||||||||||.||||||||||||||
BSU11730___co    151 AAGCCGGCTTACCATGAGAAGCAGCAGGAGGAAGCCGTGGCACAGGATGT    200

BSNT_01959___    195 CCTGCAAGAAGACCAAAAGCCTGCAGCCGAACCAGTGAGTCAGCAAATAC    244
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU11730___co    201 CCTGCAAGAAGACCAAAAGCCTGCAGCCGAACCAGTGAGTCAGCAAACAC    250

BSNT_01959___    245 AAGAGGTGAGAGAGCCAGAGAACATAAAAAGCCAGGAGGAACAGAAACAA    294
                     ||||||.|||||||||||||||||||||||||||.|||||||||||...|
BSU11730___co    251 AAGAGGCGAGAGAGCCAGAGAACATAAAAAGCCAAGAGGAACAGAAGGCA    300

BSNT_01959___    295 GAGCCGCAGGCCGTAGAAGAAACCGTTGAACACGAGCCCCCAAAAGCAGA    344
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU11730___co    301 GAGCCGCAGGCCGTAGAAGAAACCGTTGAACACGAGCCCCCGAAAGCAGA    350

BSNT_01959___    345 AAAAAAGGAAGAGCCTGCACTTGAGGCCCGGAAGCCTGAGAAAGAACCGG    394
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11730___co    351 AAAAAAGGAAGAGCCTGCACTTGAGGCCCGGAAGCCTGAGAAAGAACCGG    400

BSNT_01959___    395 AAGCTGTCCATAGTGCTGATAAAGCGGAGGAAAAAGCACCGCCGGCACGA    444
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11730___co    401 AAGCTGTCCATAGTGCTGATAAAGCGGAGGAAAAAGCACCGCCGGCACGA    450

BSNT_01959___    445 AAAGTGAAAAAACCGATGAGCAAGATGACGATCCACGAAAAAATTGATTT    494
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11730___co    451 AAAGTGAAAAAACCGATGAGCAAGATGACGATCCACGAAAAAATTGATTT    500

BSNT_01959___    495 TTTAACAAAGCTGCCTCATAACATGCCGAGAGCGCTTTGTTTGATTGAAG    544
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11730___co    501 TTTAACAAAGCTGCCTCATAACATGCCGAGAGCGCTTTGTTTGATTGAAG    550

BSNT_01959___    545 CCAATGGAAGAACGTACAGGGGCGTGATTGTCGGAAGAAGAAATGATTCC    594
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11730___co    551 CCAATGGAAGAACGTACAGGGGCGTGATTGTCGGAAGAAGAAATGATTCC    600

BSNT_01959___    595 GTCCTGCTTCGAACAACCGGAAACGGAGCCCCAACCGAACTGGCAATCGA    644
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11730___co    601 GTCCTGCTTCGAACAACCGGAAACGGAGCCCCAACCGAACTGGCAATCGA    650

BSNT_01959___    645 TGATATTACCTCTTTGCACCCGCTCGGTTTTTAA    678
                     ||||||||||||||||||||||||||||||||||
BSU11730___co    651 TGATATTACCTCTTTGCACCCGCTCGGTTTTTAA    684


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