Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01938 and BSU11580

See Amino acid alignment / Visit BSNT_01938 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:18
# Commandline: needle
#    -asequence dna-align/BSNT_01938___yjbK.1.22522.seq
#    -bsequence dna-align/BSU11580___yjbK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01938___yjbK-BSU11580___yjbK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01938___yjbK-BSU11580___yjbK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01938___yjbK
# 2: BSU11580___yjbK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 573
# Identity:     566/573 (98.8%)
# Similarity:   566/573 (98.8%)
# Gaps:           0/573 ( 0.0%)
# Score: 2802.0
# 
#
#=======================================

BSNT_01938___      1 ATGAGCCAAGAAATTGAAATCGAATTTAAAAACATGCTGACCAAACAAGA     50
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU11580___yj      1 ATGAGCCAAGAGATTGAAATCGAATTTAAAAACATGCTGACCAAACAAGA     50

BSNT_01938___     51 ATTCAAAAACATAGCAGCGGCACTCCAGCTGACAGAAAAAGATTTTACAG    100
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU11580___yj     51 ATTCAAAAACATAGCATCGGCACTCCAGCTGACAGAAAAAGATTTTACAG    100

BSNT_01938___    101 ATCAAAAGAATCATTATTTTGATACAGACAGCTTCGCGCTGAAACAAAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11580___yj    101 ATCAAAAGAATCATTATTTTGATACAGACAGCTTCGCGCTGAAACAAAAA    150

BSNT_01938___    151 CAAGCTGCGCTTCGTATCCGCAGAAAAAACGGAAAGTATGTCCTTACATT    200
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU11580___yj    151 CATGCTGCGCTTCGTATCCGCAGAAAAAACGGAAAGTATGTCCTTACATT    200

BSNT_01938___    201 AAAGGAGCCGGCTGATGTGGGGCTTCTGGAAACGCACCAGCAGCTTTCAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11580___yj    201 AAAGGAGCCGGCTGATGTGGGGCTTCTGGAAACGCACCAGCAGCTTTCAG    250

BSNT_01938___    251 AGGTATCAGATCTCGCTGGATTTTCAGTTCCCGAGGGCCCTGTGAAGGAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11580___yj    251 AGGTATCAGATCTCGCTGGATTTTCAGTTCCCGAGGGCCCTGTGAAGGAC    300

BSNT_01938___    301 CAGCTGCACAAGCTTCAGATCGATACGGATGCCATTCAATACTTTGGATC    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU11580___yj    301 CAGCTGCACAAGCTTCAGATCGATACGGATGCCATACAATACTTTGGATC    350

BSNT_01938___    351 TTTAGCAACAAACCGTGCGGAAAAAGAAACAGAAAAAGGCTTAATAGTTT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11580___yj    351 TTTAGCAACAAACCGTGCGGAAAAAGAAACAGAAAAAGGCTTAATAGTTT    400

BSNT_01938___    401 TAGACCACAGCCGATATTTAAATAAAGAGGACTATGAAATTGAATTTGAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11580___yj    401 TAGACCACAGCCGATATTTAAATAAAGAGGACTATGAAATTGAATTTGAG    450

BSNT_01938___    451 GCGGCGGATTGGCATGAGGGCAGAAAAGCTTTCGAGAAGCTGCTTCAGCA    500
                     ||||||||||||||||||||||||.||||.|||||.||||||||||||||
BSU11580___yj    451 GCGGCGGATTGGCATGAGGGCAGACAAGCCTTCGAAAAGCTGCTTCAGCA    500

BSNT_01938___    501 ATTCAGCATTCCTCAGCGCGAAACCAAAAATAAAATTCTGCGTTTTTATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11580___yj    501 ATTCAGCATTCCTCAGCGCGAAACCAAAAATAAAATTCTGCGTTTTTATG    550

BSNT_01938___    551 AAGAAAAACGAAAGTCTATATAA    573
                     |||||||||||||||||||||||
BSU11580___yj    551 AAGAAAAACGAAAGTCTATATAA    573


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