Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01929 and BSU11530

See Amino acid alignment / Visit BSNT_01929 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:17
# Commandline: needle
#    -asequence dna-align/BSNT_01929___yjbF.1.22522.seq
#    -bsequence dna-align/BSU11530___coiA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01929___yjbF-BSU11530___coiA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01929___yjbF-BSU11530___coiA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01929___yjbF
# 2: BSU11530___coiA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1152
# Identity:    1106/1152 (96.0%)
# Similarity:  1106/1152 (96.0%)
# Gaps:          30/1152 ( 2.6%)
# Score: 5466.0
# 
#
#=======================================

BSNT_01929___      1 TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGC     50
                                                   ||||||||||||||||||||
BSU11530___co      1 ------------------------------ATGTTTCACCTTCTAGGCGC     20

BSNT_01929___     51 TCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co     21 TCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCG     70

BSNT_01929___    101 GGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co     71 GGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCC    120

BSNT_01929___    151 CATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTA    200
                     |||||||||||||||||||||.|||||||||||||.||||||||||||||
BSU11530___co    121 CATAAACAGAACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTA    170

BSNT_01929___    201 CCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGG    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU11530___co    171 CCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACGCAACGGG    220

BSNT_01929___    251 CTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co    221 CTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGAC    270

BSNT_01929___    301 GTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co    271 GTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC    320

BSNT_01929___    351 CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co    321 CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG    370

BSNT_01929___    401 AAGGAATCATTCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACT    450
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU11530___co    371 AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACT    420

BSNT_01929___    451 GCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGC    500
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU11530___co    421 GCTTCGTCCTTTTATCAGCTTTCAACTTTTCATTGGCAGTTTATCAATGC    470

BSNT_01929___    501 AAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTC    550
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU11530___co    471 AAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTC    520

BSNT_01929___    551 TCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTCTTATTCCTCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co    521 TCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTCTTATTCCTCA    570

BSNT_01929___    601 GTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATCTTTTTTTCAC    650
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU11530___co    571 GTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCAC    620

BSNT_01929___    651 TGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co    621 TGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACC    670

BSNT_01929___    701 GTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAATAAATCGCCTT    750
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU11530___co    671 GTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT    720

BSNT_01929___    751 AGGCTGCTGTTTTATGAGAAGCGGCAGACATCTTTTTCTTTTCTGCCGAC    800
                     ||||||||||||||||||||.||.|||||..|||||||||||||||||||
BSU11530___co    721 AGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC    770

BSNT_01929___    801 TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co    771 TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTT    820

BSNT_01929___    851 TTGTGTGGCAGGGGTTTCTGTATTTGTTTATGACGGATCTTGGAGGTAAA    900
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU11530___co    821 TTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAA    870

BSNT_01929___    901 CGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co    871 CGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACAT    920

BSNT_01929___    951 TCATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTT   1000
                     ||||||||||||||||||||||||||..||||||||||||||||||||||
BSU11530___co    921 TCATAATAAGAACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTT    970

BSNT_01929___   1001 CAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co    971 CAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTA   1020

BSNT_01929___   1051 AGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCAT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU11530___co   1021 AGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCAT   1070

BSNT_01929___   1101 ACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co   1071 ACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT   1120

BSNT_01929___   1151 GA   1152
                     ||
BSU11530___co   1121 GA   1122


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