Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01929 and BSU11530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:17
# Commandline: needle
# -asequence dna-align/BSNT_01929___yjbF.1.22522.seq
# -bsequence dna-align/BSU11530___coiA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01929___yjbF-BSU11530___coiA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01929___yjbF-BSU11530___coiA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01929___yjbF
# 2: BSU11530___coiA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1152
# Identity: 1106/1152 (96.0%)
# Similarity: 1106/1152 (96.0%)
# Gaps: 30/1152 ( 2.6%)
# Score: 5466.0
#
#
#=======================================
BSNT_01929___ 1 TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGC 50
||||||||||||||||||||
BSU11530___co 1 ------------------------------ATGTTTCACCTTCTAGGCGC 20
BSNT_01929___ 51 TCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co 21 TCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCG 70
BSNT_01929___ 101 GGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co 71 GGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCC 120
BSNT_01929___ 151 CATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTA 200
|||||||||||||||||||||.|||||||||||||.||||||||||||||
BSU11530___co 121 CATAAACAGAACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTA 170
BSNT_01929___ 201 CCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGG 250
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU11530___co 171 CCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACGCAACGGG 220
BSNT_01929___ 251 CTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co 221 CTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGAC 270
BSNT_01929___ 301 GTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co 271 GTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC 320
BSNT_01929___ 351 CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co 321 CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG 370
BSNT_01929___ 401 AAGGAATCATTCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACT 450
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU11530___co 371 AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACT 420
BSNT_01929___ 451 GCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGC 500
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU11530___co 421 GCTTCGTCCTTTTATCAGCTTTCAACTTTTCATTGGCAGTTTATCAATGC 470
BSNT_01929___ 501 AAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTC 550
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU11530___co 471 AAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTC 520
BSNT_01929___ 551 TCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTCTTATTCCTCA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co 521 TCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTCTTATTCCTCA 570
BSNT_01929___ 601 GTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATCTTTTTTTCAC 650
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU11530___co 571 GTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCAC 620
BSNT_01929___ 651 TGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACC 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co 621 TGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACC 670
BSNT_01929___ 701 GTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAATAAATCGCCTT 750
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU11530___co 671 GTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT 720
BSNT_01929___ 751 AGGCTGCTGTTTTATGAGAAGCGGCAGACATCTTTTTCTTTTCTGCCGAC 800
||||||||||||||||||||.||.|||||..|||||||||||||||||||
BSU11530___co 721 AGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC 770
BSNT_01929___ 801 TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTT 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co 771 TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTT 820
BSNT_01929___ 851 TTGTGTGGCAGGGGTTTCTGTATTTGTTTATGACGGATCTTGGAGGTAAA 900
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU11530___co 821 TTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAA 870
BSNT_01929___ 901 CGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACAT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co 871 CGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACAT 920
BSNT_01929___ 951 TCATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTT 1000
||||||||||||||||||||||||||..||||||||||||||||||||||
BSU11530___co 921 TCATAATAAGAACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTT 970
BSNT_01929___ 1001 CAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co 971 CAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTA 1020
BSNT_01929___ 1051 AGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCAT 1100
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU11530___co 1021 AGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCAT 1070
BSNT_01929___ 1101 ACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11530___co 1071 ACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT 1120
BSNT_01929___ 1151 GA 1152
||
BSU11530___co 1121 GA 1122
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