Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01894 and BSU11300

See Amino acid alignment / Visit BSNT_01894 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:13
# Commandline: needle
#    -asequence dna-align/BSNT_01894___med.1.22522.seq
#    -bsequence dna-align/BSU11300___med.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01894___med-BSU11300___med.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01894___med-BSU11300___med.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01894___med
# 2: BSU11300___med
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 954
# Identity:     946/954 (99.2%)
# Similarity:   946/954 (99.2%)
# Gaps:           0/954 ( 0.0%)
# Score: 4698.0
# 
#
#=======================================

BSNT_01894___      1 TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11300___me      1 TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGG     50

BSNT_01894___     51 ATGTGGAAAAACTCCGTTCAAAGGAAAAATTGAGAAGGTCGGCATGCTCT    100
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU11300___me     51 ATGTGGACAAACTCCGTTCAAAGGAAAAATTGAGAAGGTCGGCATGCTCT    100

BSNT_01894___    101 TTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11300___me    101 TTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGA    150

BSNT_01894___    151 TTACTGAATATACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11300___me    151 TTACTGAATATACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGG    200

BSNT_01894___    201 CGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGATTTTCATAAGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11300___me    201 CGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGATTTTCATAAGA    250

BSNT_01894___    251 GGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11300___me    251 GGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTT    300

BSNT_01894___    301 AACTTGGTCGGCGAAGATTATCCAGATATGGAATTCGTCATTTCCAATGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11300___me    301 AACTTGGTCGGCGAAGATTATCCAGATATGGAATTCGTCATTTCCAATGC    350

BSNT_01894___    351 GAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA    400
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU11300___me    351 GAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA    400

BSNT_01894___    401 TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11300___me    401 TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAG    450

BSNT_01894___    451 GTCGGTGTAATTGCTTCCTTTACGTGGCAGCCTGAGGTGGACGGTTTTAT    500
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU11300___me    451 GTCGGTGTAATTGCTTCCTTTACGTGGCAGCCTGAGGTTGACGGTTTTAT    500

BSNT_01894___    501 CAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11300___me    501 CAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATA    550

BSNT_01894___    551 CGGATCATTGGGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11300___me    551 CGGATCATTGGGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATG    600

BSNT_01894___    601 AAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACGGGTATAATGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11300___me    601 AAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACGGGTATAATGT    650

BSNT_01894___    651 CCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACG    700
                     .|||||||||||||||||||||||||||||||||||||||||.|||||||
BSU11300___me    651 TCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACG    700

BSNT_01894___    701 TCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11300___me    701 TCACAGATCAATCGGATCTGGGCGAGAATACCGTATTAACCAGCACGGTG    750

BSNT_01894___    751 CAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11300___me    751 CAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG    800

BSNT_01894___    801 CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTG    850
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU11300___me    801 CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTG    850

BSNT_01894___    851 AGATGGGAACATTCAGCCCGCTCGTCGACAAAGACTTTCAGCAAAGAATC    900
                     ||||||||||||||||||||||||||||..||||||||||||||||||||
BSU11300___me    851 AGATGGGAACATTCAGCCCGCTCGTCGATCAAGACTTTCAGCAAAGAATC    900

BSNT_01894___    901 GCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11300___me    901 GCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGA    950

BSNT_01894___    951 GTAA    954
                     ||||
BSU11300___me    951 GTAA    954


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