Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01883 and BSU11230

See Amino acid alignment / Visit BSNT_01883 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:11
# Commandline: needle
#    -asequence dna-align/BSNT_01883___carA.1.22522.seq
#    -bsequence dna-align/BSU11230___carA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01883___carA-BSU11230___carA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01883___carA-BSU11230___carA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01883___carA
# 2: BSU11230___carA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1062
# Identity:    1036/1062 (97.6%)
# Similarity:  1036/1062 (97.6%)
# Gaps:           0/1062 ( 0.0%)
# Score: 5076.0
# 
#
#=======================================

BSNT_01883___      1 ATGGAAGGTTATTTAGTGTTAGAAGATGGGACATCGTTCAGCGGCGAGCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11230___ca      1 ATGGAAGGTTATTTAGTGTTAGAAGATGGGACATCGTTCAGCGGCGAGCT     50

BSNT_01883___     51 GGACGGCCATGAAAACTGTACGGGAGAAGCTGTTTTTTTCACAGGAATGA    100
                     ||||||.|||||||||||.|||||||||||||||||||||||||||||||
BSU11230___ca     51 GGACGGTCATGAAAACTGCACGGGAGAAGCTGTTTTTTTCACAGGAATGA    100

BSNT_01883___    101 CAGGCTACCAGGAAGTGCTGACAGATCCATCGTATAAGGGACAGATTATT    150
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU11230___ca    101 CAGGCTACCAGGAAGTGCTGACAGATCCATCATATAAGGGACAGATTATT    150

BSNT_01883___    151 GTATTTACCTACCCGCTGATTGGCAACTACGGCATAAATGAAAAGGACTT    200
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU11230___ca    151 GTATTTACCTACCCGCTGATTGGCAACTACGGCATAAATGAAAAGGATTT    200

BSNT_01883___    201 TGAAAGCAAGAAACCGCAAGTAAAAGCAGCGGTTGTCTATGAGGCGTGTG    250
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU11230___ca    201 TGAAAGCAAGAAACCGCAAGTAAAAGCCGCGGTTGTCTATGAGGCGTGTG    250

BSNT_01883___    251 ATCACTTTTCTCATTATGAAGCGGTATACAGCCTCAAGGAGTATTTACAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU11230___ca    251 ATCACTTTTCTCATTATGAAGCGGTATACAGCCTCAAGGAGTATCTACAG    300

BSNT_01883___    301 AAATGGAACATTCCGCTGTTAACCCATGTTGATACGAGGGCTGTCGTGAA    350
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU11230___ca    301 AAATGGAATATTCCGCTGTTAACCCATGTTGATACGAGGGCTGTCGTGAA    350

BSNT_01883___    351 GAAAATCCGGGCAAACGGGACGATGGGTGCAACAGTCACAGCCTCTAAAG    400
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU11230___ca    351 GAAAATCCGGGCAAACGGGACGATGGGTGCGACAGTCACAGCCTCTAAAG    400

BSNT_01883___    401 AAGGAGCTGAGATGGCCCTTCAACCAGAGAATGTGGCAGAGCAGGCTTCA    450
                     |||||||||||||.|||||||||||||||||||||||||||||||||||.
BSU11230___ca    401 AAGGAGCTGAGATTGCCCTTCAACCAGAGAATGTGGCAGAGCAGGCTTCC    450

BSNT_01883___    451 GCCCAGGAAATCAGCACATTCGGCGACGGGAATAAACATATCGCTCTCAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11230___ca    451 GCCCAGGAAATCAGCACATTCGGCGACGGGAATAAACATATCGCTCTCAT    500

BSNT_01883___    501 TGATTTTGGCTATAAAAAGTCAATCGCATCATCACTTGTCAAAAGAGGCT    550
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU11230___ca    501 TGATTTTGGCTATAAAAAGTCAATCGCATCATCACTTGTCAAACGAGGCT    550

BSNT_01883___    551 GCAAGGTTACTGTGGTGCCATACCAGCAAATGGAGGCCGTATACAACATC    600
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU11230___ca    551 GCAAGGTTACCGTGGTGCCATACCAGCAAATGGAGGCCGTATACAACATC    600

BSNT_01883___    601 AAACCCGATGGCATTGTGCTATCGAACGGACCTGGAGATCCGAAAGCAAT    650
                     |||||||||||.|||||||||||||||||||||||||||||||||||.||
BSU11230___ca    601 AAACCCGATGGAATTGTGCTATCGAACGGACCTGGAGATCCGAAAGCCAT    650

BSNT_01883___    651 CCAGCCATATTTAGGAAAGATCAAAAGCATCATCAGCCGCTTTCCGACTC    700
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU11230___ca    651 TCAGCCATATTTAGGAAAGATCAAAAGCATCATCAGCCGCTTTCCGACTC    700

BSNT_01883___    701 TCGGCATTTGTCTCGGACATCAGCTGATCGCGCTCGCGTTCGGAGGGAAT    750
                     |.||||||||||||||||||||||||||||||||||||||.|||||||||
BSU11230___ca    701 TAGGCATTTGTCTCGGACATCAGCTGATCGCGCTCGCGTTTGGAGGGAAT    750

BSNT_01883___    751 ACTTTTAAGCTGCCATTCGGACACAGGGGAGCTAATCATCCGGTCATCGA    800
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU11230___ca    751 ACTTTTAAGCTGCCATTCGGGCACAGGGGAGCTAATCATCCGGTCATCGA    800

BSNT_01883___    801 CCGTGAGACGAAACGGGTCTTTATGACAAGCCAAAACCACAGCTATGTGG    850
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU11230___ca    801 CCGTAAGACGAAACGGGTCTTTATGACAAGCCAAAACCACAGCTATGTGG    850

BSNT_01883___    851 TTGATGAACAGTCGATTAATGAAGAAGAGCTCACGATCAGATTTCATCAT    900
                     ||||||||||||||||||||||||||||||||||.|||||.|||||||||
BSU11230___ca    851 TTGATGAACAGTCGATTAATGAAGAAGAGCTCACCATCAGGTTTCATCAT    900

BSNT_01883___    901 GTCAATGATACGTCAGTTGAAGGGCTTGCCCATAAAAAACTGCCAGTCAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU11230___ca    901 GTCAATGATACGTCAGTTGAAGGGCTTGCCCATAAAAAACTGCCTGTCAT    950

BSNT_01883___    951 GAGTGTGCAATTCCACCCGGAGGCCCATCCCGGACCGGCGGAAAGCGAAT   1000
                     ||||||.||||||||||||||.||||||||||||||.|||||||||||||
BSU11230___ca    951 GAGTGTTCAATTCCACCCGGAAGCCCATCCCGGACCTGCGGAAAGCGAAT   1000

BSNT_01883___   1001 GGGTTTTTGATGATTATCTAAAGAATGTGATACCAGCAAGGAGAGAAATC   1050
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU11230___ca   1001 GGATTTTTGATGATTATCTAAAGAATGTGATACCAGCAAGGAGAGAAATC   1050

BSNT_01883___   1051 GCGCATGCCTAA   1062
                     ||||||||||||
BSU11230___ca   1051 GCGCATGCCTAA   1062


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