Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01869 and BSU11140

See Amino acid alignment / Visit BSNT_01869 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:09
# Commandline: needle
#    -asequence dna-align/BSNT_01869___yitU.1.22522.seq
#    -bsequence dna-align/BSU11140___yitU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01869___yitU-BSU11140___yitU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01869___yitU-BSU11140___yitU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01869___yitU
# 2: BSU11140___yitU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 813
# Identity:     790/813 (97.2%)
# Similarity:   790/813 (97.2%)
# Gaps:           0/813 ( 0.0%)
# Score: 3858.0
# 
#
#=======================================

BSNT_01869___      1 ATGGAGACAAAACCCTATTTAATCGCATTAGATTTAGATGGAACATTATT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11140___yi      1 ATGGAGACAAAACCCTATTTAATCGCATTAGATTTAGATGGAACATTATT     50

BSNT_01869___     51 AAAGGATGATAAAACCATATCTGAAAACACCCTTCAGACGATACAGCGCC    100
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU11140___yi     51 AAAGGATGATAAAACCATATCTGAAAACACCCTTCATACGATACAGCGCC    100

BSNT_01869___    101 TAAAAGATGACGGGCATTATGTCTGCATCTCAACGGGGCGTCCGTACCGT    150
                     ||||||||||||||||||||||||||||||||||.||.||||||||.|||
BSU11140___yi    101 TAAAAGATGACGGGCATTATGTCTGCATCTCAACAGGCCGTCCGTATCGT    150

BSNT_01869___    151 TCAAGTTCCATGTACTACCAGCAGATGGAACTGACAACGCCGATTGTCAA    200
                     |||||||||||||||||||||||||||||.|||||||||||.||||||||
BSU11140___yi    151 TCAAGTTCCATGTACTACCAGCAGATGGAGCTGACAACGCCAATTGTCAA    200

BSNT_01869___    201 TTTTAACGGAGCATTTGTCCATCATCCGCAGGACGACAGCTGGGGACGGT    250
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU11140___yi    201 TTTTAACGGAGCATTTGTCCATCATCCGCAAGACGACAGCTGGGGACGGT    250

BSNT_01869___    251 ATCATACGTCACTCCCGCTTGATGTTGTCAAACAGCTCGTGGATATCAGC    300
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU11140___yi    251 ATCATACGTCACTGCCGCTTGATGTTGTCAAACAGCTCGTGGATATCAGC    300

BSNT_01869___    301 GAGAGCTACAACGTACATAATGTGCTTGCTGAAGTGATTGATGACGTATA    350
                     ||||||||||||||||||||.||||||||||||||||||||.||||||||
BSU11140___yi    301 GAGAGCTACAACGTACATAACGTGCTTGCTGAAGTGATTGACGACGTATA    350

BSNT_01869___    351 CTTTCATTACCATGATGAGCACCTGATTGATGCCTTTAACATGAACACAA    400
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU11140___yi    351 CTTTCATTACCATGATGAGCACCTGATAGATGCCTTTAACATGAACACAA    400

BSNT_01869___    401 CAAATGTAACGGTCGGAGACTTGCGGGAAAATCTTGGTGAAGATGTGACG    450
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU11140___yi    401 CAAATGTAACGGTCGGAGACTTGCGGGAAAATCTCGGTGAAGATGTGACG    450

BSNT_01869___    451 TCTGTACTCATACATGCAAAAGAAGAGGATGTGCCGGCAATACGCTCATA    500
                     ||.|||||||||||||||||.|||||||||||||||||||||||||||||
BSU11140___yi    451 TCCGTACTCATACATGCAAAGGAAGAGGATGTGCCGGCAATACGCTCATA    500

BSNT_01869___    501 TTTATCGGATGTGCATGCCGAGGTAATCGACCATAGAAGATGGGCCGCAC    550
                     ||||||||||||||||||||||||.|||||||||||||||||||||||.|
BSU11140___yi    501 TTTATCGGATGTGCATGCCGAGGTGATCGACCATAGAAGATGGGCCGCTC    550

BSNT_01869___    551 CGTGGCATGTCATTGAAATTATCAAAAGCGGCATGAATAAAGCGGTCGGC    600
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU11140___yi    551 CTTGGCATGTCATTGAAATTATCAAAAGCGGCATGAATAAAGCGGTCGGC    600

BSNT_01869___    601 CTGCAGAAAATCAGCGATTATTACGGCCTGCCGAGGGAGCGGATCATTGC    650
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU11140___yi    601 CTGCAGAAAATCAGCGATTATTACGGCGTGCCGAGGGAGCGGATCATTGC    650

BSNT_01869___    651 TTTCGGGGATGAGGATAACGATTTGGAAATGCTTGAATTTGCAGGCTGCG    700
                     |||.||.|||||||||||||||||||||||||||||||||||||||||||
BSU11140___yi    651 TTTTGGAGATGAGGATAACGATTTGGAAATGCTTGAATTTGCAGGCTGCG    700

BSNT_01869___    701 GCGTTGCAATGGGAAATGGAATTGACGCGGTCAAGCAGATTGCCAACCGA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11140___yi    701 GCGTTGCAATGGGAAATGGAATTGACGCGGTCAAGCAGATTGCCAACCGA    750

BSNT_01869___    751 ACAACGGCTACAAATGAAGAGGACGGCGTTGCAAGGTTTTTGAAAGAATA    800
                     ||.|||||.||||||||||||||||||||.||||||||||||||||||||
BSU11140___yi    751 ACTACGGCCACAAATGAAGAGGACGGCGTGGCAAGGTTTTTGAAAGAATA    800

BSNT_01869___    801 TTTCTCACTTTAA    813
                     |||||||||||||
BSU11140___yi    801 TTTCTCACTTTAA    813


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