Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01867 and BSU11130
See
Amino acid alignment /
Visit
BSNT_01867 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:09
# Commandline: needle
# -asequence dna-align/BSNT_01867.1.22522.seq
# -bsequence dna-align/BSU11130___ipi.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01867-BSU11130___ipi.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01867-BSU11130___ipi.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01867
# 2: BSU11130___ipi
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity: 358/456 (78.5%)
# Similarity: 358/456 (78.5%)
# Gaps: 96/456 (21.1%)
# Score: 1782.0
#
#
#=======================================
BSNT_01867 1 GTGAAACGGCTGCTTGTGATGCTCCTCCCCGTGCTGCTTTTGATAGGCTG 50
BSU11130___ip 0 -------------------------------------------------- 0
BSNT_01867 51 CGGGAAAGATGAGCAGACAGAACCCGATAAGGAGGTATCAGGCGGAATGG 100
||||
BSU11130___ip 1 ----------------------------------------------ATGG 4
BSNT_01867 101 AGAATCAAGAGGTTGTTTTATCTATTGACGCAATTCAGGAGCCTGAACAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11130___ip 5 AGAATCAAGAGGTTGTTTTATCTATTGACGCAATTCAGGAGCCTGAACAA 54
BSNT_01867 151 ATCAAGTTTAACATGTCGCTGAAGAACCAAAGTGAACGTGCTATTGAGTT 200
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU11130___ip 55 ATCAAGTTTAACATGTCGCTGAAGAACCAAAGCGAACGTGCTATTGAGTT 104
BSNT_01867 201 TCAATTCAGCACAGGGCAAAAATTTGAACTTGTCGTGTATGATTCTGAGC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11130___ip 105 TCAATTCAGCACAGGGCAAAAATTTGAACTTGTCGTGTATGATTCTGAGC 154
BSNT_01867 251 ACAAAGAAAGATACCGTTATTCGAAAGACAAAATGTTTACGCAGGCTTTT 300
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU11130___ip 155 ACAAAGAAAGATACCGTTATTCGAAAGAAAAAATGTTTACGCAGGCTTTT 204
BSNT_01867 301 CAAAACCTGACGCTTGAATCTGGAGAAACATATGATTTCTCTGATGTGTG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11130___ip 205 CAAAACCTGACGCTTGAATCTGGAGAAACATATGATTTCTCTGATGTGTG 254
BSNT_01867 351 GAAGGAAGTCCCTGAGCCCGGAACCTATGAGGTAAAGGTGACATTTAAGG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11130___ip 255 GAAGGAAGTCCCTGAGCCCGGAACCTATGAGGTAAAGGTGACATTTAAGG 304
BSNT_01867 401 GCAGGGCGGAAAATCTCAAGCAGGTTCAGGCTGTTCAGCAGTTTGAAGTC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11130___ip 305 GCAGGGCGGAAAATCTCAAGCAGGTTCAGGCTGTTCAGCAGTTTGAAGTC 354
BSNT_01867 451 AAATAA 456
||||||
BSU11130___ip 355 AAATAA 360
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.