Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01861 and BSU11020

See Amino acid alignment / Visit BSNT_01861 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:09
# Commandline: needle
#    -asequence dna-align/BSNT_01861___yitK.1.22522.seq
#    -bsequence dna-align/BSU11020___yitK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01861___yitK-BSU11020___yitK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01861___yitK-BSU11020___yitK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01861___yitK
# 2: BSU11020___yitK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 492
# Identity:     488/492 (99.2%)
# Similarity:   488/492 (99.2%)
# Gaps:           0/492 ( 0.0%)
# Score: 2424.0
# 
#
#=======================================

BSNT_01861___      1 ATGGCAAAAGAAAGCTCATTTGATATTGTATCCAAGGTGGAATTGCCTGA     50
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU11020___yi      1 ATGGCAAAAGAAAGTTCATTTGATATTGTATCCAAGGTGGAATTGCCTGA     50

BSNT_01861___     51 AGTGCAAAACGCAATCCAAATCGCACTGAAGGAAATCAGTACCCGATATG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11020___yi     51 AGTGCAAAACGCAATCCAAATCGCACTGAAGGAAATCAGTACCCGATATG    100

BSNT_01861___    101 ACTTTAAAGGCAGCAAAAGCGACATTTCTTTAGATAAAGAGGAGCTGGTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11020___yi    101 ACTTTAAAGGCAGCAAAAGCGACATTTCTTTAGATAAAGAGGAGCTGGTC    150

BSNT_01861___    151 CTCGTTTCCGATGACGAATTCAAATTAAGCCAGCTGAAAGATGTGCTGGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11020___yi    151 CTCGTTTCCGATGACGAATTCAAATTAAGCCAGCTGAAAGATGTGCTGGT    200

BSNT_01861___    201 CAGCAAATTGATTAAACGAAACGTACCGACAAAAAACATTGAGTACGGCA    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU11020___yi    201 CAGCAAATTGATTAAACGAAACGTACCGACAAAAAACATTGATTACGGCA    250

BSNT_01861___    251 AGGTTGAAAACGCGTCAGGCGGAACGGTGCGCCAGCGCGCAAAGCTTGTT    300
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU11020___yi    251 AGGTTGAAAACGCGTCAGGCGGAACGGTGCGCCAGCGTGCAAAGCTTGTT    300

BSNT_01861___    301 CAAGGCATTGACAAGGACAACGCAAAAAAAATCAATACGATCATCAAAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11020___yi    301 CAAGGCATTGACAAGGACAACGCAAAAAAAATCAATACGATCATCAAAAA    350

BSNT_01861___    351 CTCCGGACTGAAAGTAAAGTCTCAGGTGCAGGATGATCAAGTGCGTGTCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU11020___yi    351 CTCCGGACTGAAAGTAAAGTCTCAGGTGCAGGATGATCAAGTGCGTGTCA    400

BSNT_01861___    401 CCGGAAAAAACAAAGATGACCTGCAGCAGATTATCTCAGCTGTGCGGGGA    450
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU11020___yi    401 CCGGAAAAAACAAAGATGACCTGCAGCAGATTATCTCAGCTGTACGGGGA    450

BSNT_01861___    451 GCAGATCTGCCAATTGACGTTCAATTTATAAATTTCAGATAA    492
                     ||||||||||||||||||||||||||||||||||||||||||
BSU11020___yi    451 GCAGATCTGCCAATTGACGTTCAATTTATAAATTTCAGATAA    492


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