Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01844 and BSU10830

See Amino acid alignment / Visit BSNT_01844 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:07
# Commandline: needle
#    -asequence dna-align/BSNT_01844___yisR.1.22522.seq
#    -bsequence dna-align/BSU10830___yisR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01844___yisR-BSU10830___yisR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01844___yisR-BSU10830___yisR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01844___yisR
# 2: BSU10830___yisR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 864
# Identity:     858/864 (99.3%)
# Similarity:   858/864 (99.3%)
# Gaps:           0/864 ( 0.0%)
# Score: 4266.0
# 
#
#=======================================

BSNT_01844___      1 ATGCCTCGCATCCTGTTTACAGTCCCGCCTTTTCCGGTATTTATCGCAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10830___yi      1 ATGCCTCGCATCCTGTTTACAGTCCCGCCTTTTCCGGTATTTATCGCAGC     50

BSNT_01844___     51 TGGGGAAGGGGTTTTTAAAAAAGGAGAAACCCATGTGAAACGTGTATTCT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10830___yi     51 TGGGGAAGGGGTTTTTAAAAAAGGAGAAACCCATGTGAAACGTGTATTCT    100

BSNT_01844___    101 CCGTGTTTGATCTGATATATGTCAAACAGGGAACGTTATATATAACGGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10830___yi    101 CCGTGTTTGATCTGATATATGTCAAACAGGGAACGTTATATATAACGGAA    150

BSNT_01844___    151 AATGAAACATCGTTTTCTGTTGAAGGCGGCGAGTACATCTTGCTTTCTCC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10830___yi    151 AATGAAACATCGTTTTCTGTTGAAGGCGGCGAGTACATCTTGCTTTCTCC    200

BSNT_01844___    201 CGGTCTTGAACACTACGGGACGAAGGGCAGTGATGAAGCAACCTCCTACT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10830___yi    201 CGGTCTTGAACACTACGGGACGAAGGGCAGTGATGAAGCAACCTCCTACT    250

BSNT_01844___    251 ATTGGCTTCACTTCGATGAACATCGATATGAATTTACGGCAAAGGGAGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10830___yi    251 ATTGGCTTCACTTCGATGAACATCGATATGAATTTACGGCAAAGGGAGGC    300

BSNT_01844___    301 AGCAACTGGTCTGAGCTTCAGCAGGAAAAAGGGAGCTTCGAAGAGCCGGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU10830___yi    301 AGCAACTGGTCTGAGCTTCAGCAGGAAAAAGGGAGCTTCGAAGAGCTGGC    350

BSNT_01844___    351 CCGCTACGGATTGGCCTTGCCGAGAAAAGGCAAGGTGCAGCGCCCGCAGT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10830___yi    351 CCGCTACGGATTGGCCTTGCCGAGAAAAGGCAAGGTGCAGCGCCCGCAGT    400

BSNT_01844___    401 TTATGGCGCAGCAGTTTGAAAAGCTGATCGATTACTCTGCGGAAAACTCT    450
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU10830___yi    401 TTATGGCGCAGCAGTTTGAAAAGCTGATCGATTACTCCGCGGAAAACTCT    450

BSNT_01844___    451 GATTTGCCGCTCAGAAAGCAAATTTTATTTGCGGAGCTGATGCTGCATCT    500
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU10830___yi    451 GATTTGCCGCTCAGAAAGCAAATTTTATTTGAGGAGCTGATGCTGCATCT    500

BSNT_01844___    501 TCAAAAAGAAGCGTTCCAAATACCGTCTGCGAAAGAGCGGGTAGCCTGGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10830___yi    501 TCAAAAAGAAGCGTTCCAAATACCGTCTGCGAAAGAGCGGGTAGCCTGGG    550

BSNT_01844___    551 AGGCGGCCCGGTACTTACAGGAGCACTATAAGGAAAAGACGACAATCAAG    600
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU10830___yi    551 AGGCGGCCCGGTATTTACAGGAGCACTATAAGGAAAAGACGACAATCAAG    600

BSNT_01844___    601 GATCTGTCGCTCGCCCTTCACTACCATCAGGATTATGTGAGCCGCTGTAT    650
                     |||||||||||||||||||||||.|||||||||||||||||||||||.||
BSU10830___yi    601 GATCTGTCGCTCGCCCTTCACTATCATCAGGATTATGTGAGCCGCTGCAT    650

BSNT_01844___    651 GCAGCAGGTGCTCGGCGTAACTCCGGCACAATACACGAACCGGGTGAGAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10830___yi    651 GCAGCAGGTGCTCGGCGTAACTCCGGCACAATACACGAACCGGGTGAGAA    700

BSNT_01844___    701 TGACGGAAGCGAAGCGTCTTTTATCCTCTACAAATGATAAAATGGGCGTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10830___yi    701 TGACGGAAGCGAAGCGTCTTTTATCCTCTACAAATGATAAAATGGGCGTT    750

BSNT_01844___    751 ATTGCGGAAACGGTCGGAATGGAAGATCCGACATACTTTTCAAAACTCTT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10830___yi    751 ATTGCGGAAACGGTCGGAATGGAAGATCCGACATACTTTTCAAAACTCTT    800

BSNT_01844___    801 TAAGCAGATAGAAGGCATTTCACCAATTGAATACCGGAAAATTGTCAGCC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10830___yi    801 TAAGCAGATAGAAGGCATTTCACCAATTGAATACCGGAAAATTGTCAGCC    850

BSNT_01844___    851 GGAAAGTTCAATAA    864
                     ||||||||||||||
BSU10830___yi    851 GGAAAGTTCAATAA    864


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01844 and BSU10830

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
