Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01813 and BSU10640

See Amino acid alignment / Visit BSNT_01813 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:02
# Commandline: needle
#    -asequence dna-align/BSNT_01813___sbcD.1.22522.seq
#    -bsequence dna-align/BSU10640___sbcD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01813___sbcD-BSU10640___sbcD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01813___sbcD-BSU10640___sbcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01813___sbcD
# 2: BSU10640___sbcD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1176
# Identity:    1168/1176 (99.3%)
# Similarity:  1168/1176 (99.3%)
# Gaps:           0/1176 ( 0.0%)
# Score: 5808.0
# 
#
#=======================================

BSNT_01813___      1 TTGCGGATTTTACATACGGCTGACTGGCATCTTGGAAAAACGCTTGAAGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb      1 TTGCGGATTTTACATACGGCTGACTGGCATCTTGGAAAAACGCTTGAAGG     50

BSNT_01813___     51 AAGAAGCAGGCTGAGTGAACAGGCCGATGTGCTGGATGAAATAAATACGA    100
                     ||||||||||||||||||||||||||||||||||||||||.|.|||||||
BSU10640___sb     51 AAGAAGCAGGCTGAGTGAACAGGCCGATGTGCTGGATGAACTGAATACGA    100

BSNT_01813___    101 TTGTAAAGGATGAGCAGATCGATGCCATTGTAATGGCGGGGGATGCATTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    101 TTGTAAAGGATGAGCAGATCGATGCCATTGTAATGGCGGGGGATGCATTT    150

BSNT_01813___    151 GACACCGTAAACCCGCCAGCTTTAGCCGAGCAGCTGTTTTATGAAAGCCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    151 GACACCGTAAACCCGCCAGCTTTAGCCGAGCAGCTGTTTTATGAAAGCCT    200

BSNT_01813___    201 GTCTGCGCTTAGCGACAGAGGAAAGCGCCCGATCGTCGTCATTGCCGGAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    201 GTCTGCGCTTAGCGACAGAGGAAAGCGCCCGATCGTCGTCATTGCCGGAA    250

BSNT_01813___    251 ACCACGATAATCCTGACCGTTTGTCCGCCGCTTCACCGCTGACACATGAA    300
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    251 ATCACGATAATCCTGACCGTTTGTCCGCCGCTTCACCGCTGACACATGAA    300

BSNT_01813___    301 AACGGCATTCATTTAATCGGTTATCCGACAACAGAGCCGATTCATATTGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    301 AACGGCATTCATTTAATCGGTTATCCGACAACAGAGCCGATTCATATTGA    350

BSNT_01813___    351 AGTGCCTTCAGCAGGAGAGCTTTTGGCGGTTGGAGCGCTGGCGTACCCAT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    351 AGTGCCTTCAGCAGGAGAGCTTTTGGCGGTTGGAGCGCTGGCGTACCCAT    400

BSNT_01813___    401 CTGAAGCGCGGTTAAATGAAGTGCTATCCGATACGTTTGATGAAAAGCTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    401 CTGAAGCGCGGTTAAATGAAGTGCTATCCGATACGTTTGATGAAAAGCTG    450

BSNT_01813___    451 CTCCGTGATCACTATGATGTGAAAATCAGGCAGGCGTTTGAGCATATGAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    451 CTCCGTGATCACTATGATGTGAAAATCAGGCAGGCGTTTGAGCATATGAC    500

BSNT_01813___    501 AAGCCGGTTCCGGAACGATGCAGTGAAGATTGCCGCCAGCCATATTTATG    550
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU10640___sb    501 AAGCCGGTTCCGGACCGATGCAGTGAAGATTGCCGCCAGCCATATTTATG    550

BSNT_01813___    551 TGGCAGGCGGAAACCAAACCGATTCAGAGCGGCCGATTGAAGTCGGCGGT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    551 TGGCAGGCGGAAACCAAACCGATTCAGAGCGGCCGATTGAAGTCGGCGGT    600

BSNT_01813___    601 GCATACACGGTGGCTGCTGAAAGCCTGCCGGCAGATGCCGCTTACGTTGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    601 GCATACACGGTGGCTGCTGAAAGCCTGCCGGCAGATGCCGCTTACGTTGC    650

BSNT_01813___    651 GCTCGGCCATTTGCATCGCCCGCAAACGATCAAGCGGGCGCGGACGCTTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    651 GCTCGGCCATTTGCATCGCCCGCAAACGATCAAGCGGGCGCGGACGCTTG    700

BSNT_01813___    701 CGCGTTATTCAGGATCTCCGCTCGCCTACAGCTTTTCTGAAGCGGGCTAC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    701 CGCGTTATTCAGGATCTCCGCTCGCCTACAGCTTTTCTGAAGCGGGCTAC    750

BSNT_01813___    751 GCTAAATCAGTGACGATTGTGGACGCAAAGCCTGGGGAAGAGGCCACTTG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    751 GCTAAATCAGTGACGATTGTGGACGCAAAGCCTGGGGAAGAGGCCACTTG    800

BSNT_01813___    801 GCAAGAGGTGTTATTATCAAGCGGCAAGCCACTTGTGAAGTGGAAAGCGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    801 GCAAGAGGTGTTATTATCAAGCGGCAAGCCACTTGTGAAGTGGAAAGCGG    850

BSNT_01813___    851 CAAATGGATTGAGTGAGGTGTACAGCTGGCTGGATGAAGACAGAGATCAG    900
                     ||||||||||.||||||||||||||||||||||||||||.||||||||||
BSU10640___sb    851 CAAATGGATTAAGTGAGGTGTACAGCTGGCTGGATGAAGGCAGAGATCAG    900

BSNT_01813___    901 AATGCTTGGATTGACCTGGAAATCCGTGTCGCGGACCAGCTGTCACTTGA    950
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU10640___sb    901 AATGCTTGGATTGACTTGGAAATCCGTGTCGCGGACCAGCTGTCACTTGA    950

BSNT_01813___    951 AGAGATTCACAGGCTGCGGAAGGCGCACCCGGGCTTTATCCATATCAGGC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb    951 AGAGATTCACAGGCTGCGGAAGGCGCACCCGGGCTTTATCCATATCAGGC   1000

BSNT_01813___   1001 CGGTTTTTGAAGAACGGAACAAAGACCGGGAACGGATCGAGGTTAAACAT   1050
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU10640___sb   1001 CGGTTTTTGAAGAACAGAACAAAGACCGGGAACGGATCGAGGTTAAACAT   1050

BSNT_01813___   1051 GTCTCAATCGAGGACCGCTTTAAGAAATTTTATGAAAAACAAACTGGCGG   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb   1051 GTCTCAATCGAGGACCGCTTTAAGAAATTTTATGAAAAACAAACTGGCGG   1100

BSNT_01813___   1101 TGCGGTGCCGGATGAAGAAATGGTGAAGCTGTTTTTAGAGCTTGCATCAG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10640___sb   1101 TGCGGTGCCGGATGAAGAAATGGTGAAGCTGTTTTTAGAGCTTGCATCAG   1150

BSNT_01813___   1151 GCGTTGAAGAGGAGGATGCGAAATGA   1176
                     ||||||||||||||||||||||||||
BSU10640___sb   1151 GCGTTGAAGAGGAGGATGCGAAATGA   1176


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