Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01801 and BSU10590

See Amino acid alignment / Visit BSNT_01801 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:58
# Commandline: needle
#    -asequence dna-align/BSNT_01801___yhjP.1.22522.seq
#    -bsequence dna-align/BSU10590___yhjP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01801___yhjP-BSU10590___yhjP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01801___yhjP-BSU10590___yhjP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01801___yhjP
# 2: BSU10590___yhjP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1728
# Identity:    1691/1728 (97.9%)
# Similarity:  1691/1728 (97.9%)
# Gaps:           0/1728 ( 0.0%)
# Score: 8307.0
# 
#
#=======================================

BSNT_01801___      1 TTGAAGCTGATAGAGCACTACGTGGCGCTTGTAAAAACAGGCTGCGCCGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10590___yh      1 TTGAAGCTGATAGAGCACTACGTGGCGCTTGTAAAAACAGGCTGCGCCGA     50

BSNT_01801___     51 GTATGGGCAAATGAACGAAATGACGCTCACTGAGATTGCTAACTGTTTAT    100
                     |||||||||||||||||||||||||||||||||||||||..|||||||||
BSU10590___yh     51 GTATGGGCAAATGAACGAAATGACGCTCACTGAGATTGCCGACTGTTTAT    100

BSNT_01801___    101 TTTGTACAGAAAGAAATGCAAAGCTCATTTTACATAAGCTGGAGAACAAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU10590___yh    101 TTTGTACAGAAAGAAATGCAAAGCTCATTTTACATAAGCTGGAGAACAGC    150

BSNT_01801___    151 AATTGGATTATCCGGGAAAGCGGGGCGGGGCGCGGCCGTAAATCTAAAAT    200
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU10590___yh    151 AATTGGATTATCCGGGAAAGCGGGGCGGGGCGCGGCCGCAAATCTAAAAT    200

BSNT_01801___    201 CGCGTTTCTTCGGAGGCCTGAGGAATTGCTTCTTCAAACTGCCAAGGAAT    250
                     |||||||||||||||||||||||||.||||||||||||||||.|||||||
BSU10590___yh    201 CGCGTTTCTTCGGAGGCCTGAGGAACTGCTTCTTCAAACTGCAAAGGAAT    250

BSNT_01801___    251 ATACCATGTCAGGAAAGCTTAAAAAGGCAAAGGAGCTGCTTCAGCAGTAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10590___yh    251 ATACCATGTCAGGAAAGCTTAAAAAGGCAAAGGAGCTGCTTCAGCAGTAT    300

BSNT_01801___    301 CAGTCCACATTTCCGGGGCTTCAAAACGAATATAACATGTGGCTTTCAGA    350
                     ||||||.|.|||||.|||||||||||||||||||||||||||||.|||||
BSU10590___yh    301 CAGTCCGCGTTTCCAGGGCTTCAAAACGAATATAACATGTGGCTATCAGA    350

BSNT_01801___    351 GGTATTCGGATTTGTGACGGAGACGGGCGAGAATGGGACGAAGGATGTTC    400
                     ||||||||||||||||||||||||.||||||||||||.||||||||||.|
BSU10590___yh    351 GGTATTCGGATTTGTGACGGAGACAGGCGAGAATGGGGCGAAGGATGTCC    400

BSNT_01801___    401 TGCGGCTGTTCATCACGCCCGAATCTGTCAGCAGTTTGGATCCATGCCAA    450
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU10590___yh    401 TGCGGCTGTTCATCACGCCTGAATCTGTCAGCAGTTTGGATCCATGCCAA    450

BSNT_01801___    451 ATATTTTTGCGGTCTGAGGGCCATTTCGTCAAACAGATATTTGATACACT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10590___yh    451 ATATTTTTGCGGTCTGAGGGCCATTTCGTCAAACAGATATTTGATACACT    500

BSNT_01801___    501 CTTCACGTTTGATTCGGATATGCAGGAGCCAAAGCCTCATTTGGTTCATG    550
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU10590___yh    501 CTTCACGTTTGATTCGGATATGCAGGAGCCGAAGCCTCATTTGGTTCATG    550

BSNT_01801___    551 GATGGGAAGAGGTCGAAAAAAAACAATGGAGATTTTTTCTTCGAAAAGGT    600
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU10590___yh    551 GATGGGAAGAGGTCGGAAAAAAACAATGGAGATTTTTTCTTCGAAAAGGT    600

BSNT_01801___    601 GTGTCATTTCATAATGGACAGCCGCTGACATCGCAGGACGTTGCGTTTAC    650
                     ||||.|||||||||||||||||||||||||||||.|||||||||||||||
BSU10590___yh    601 GTGTTATTTCATAATGGACAGCCGCTGACATCGCGGGACGTTGCGTTTAC    650

BSNT_01801___    651 ATTTAAGCGCTTTTTGGAACTGGGTGACAACCCGTATAAATGGCTTCTGC    700
                     ||||.||||||||||||||||||.||||||||||||||||||||||||||
BSU10590___yh    651 ATTTCAGCGCTTTTTGGAACTGGCTGACAACCCGTATAAATGGCTTCTGC    700

BSNT_01801___    701 ACGGAGTGAAACAAGTCTTAGAAAAGGGCCCTTATTGTGTGGAACTCATA    750
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU10590___yh    701 ACGGAGTGAAACAAGTCTTAGAAAAGGGCCCTTATTGTGTGGAGCTCATA    750

BSNT_01801___    751 CTCGATAAGCCGAATGCGCTTTTGCCGTATGCTCTTTGTGATGAACGGCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10590___yh    751 CTCGATAAGCCGAATGCGCTTTTGCCGTATGCTCTTTGTGATGAACGGCT    800

BSNT_01801___    801 GTCCATACTGCCGGCAGAACAGGGCGGCGGGAAAAATGGAACAGGGCCTT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10590___yh    801 GTCCATACTGCCGGCAGAACAGGGCGGCGGGAAAAATGGAACAGGGCCTT    850

BSNT_01801___    851 TTCAGGTGAATCAGCAACACAGCGGGATGCTTGTGCTTGAAGCCAATGAG    900
                     |||||.|||||||||||||.||||||||||||||||||||||||||||||
BSU10590___yh    851 TTCAGATGAATCAGCAACATAGCGGGATGCTTGTGCTTGAAGCCAATGAG    900

BSNT_01801___    901 CGCTACTTCAAGGGACGCCCCTATTTGGATCGCGTTGAGTTTGTGTTTTC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10590___yh    901 CGCTACTTCAAGGGACGCCCCTATTTGGATCGCGTTGAGTTTGTGTTTTC    950

BSNT_01801___    951 TGAGCAAGCCGGAGAGATGAACGGTTTTACCATTCAAGAAAAACAAACAA   1000
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU10590___yh    951 TGAGCAAGCCGGAGAGATGAACGGTTTTACCATTCAAGAAAAACAAACAT   1000

BSNT_01801___   1001 GTCCTGAGCAGCAAACTGTTTTTGATGAGCGGCATGTTCAGTATTTGTCG   1050
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU10590___yh   1001 GTCCTGAGCAGCAAACTGTCTTTGATGAGCGGCATGTTCAGTATTTGTCG   1050

BSNT_01801___   1051 CTCAATCTGAAAAAGAAGGGGCCTCTTCAGCACCGAAGCTTTAGAAAAGC   1100
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU10590___yh   1051 CTTAATCTGAAAAAGAAGGGGCCTCTTCAGCACCGAAGCTTTAGAAAAGC   1100

BSNT_01801___   1101 GCTCCGGCTGCTAATTTCCTCTGAACGGCTCGTTCGTGAAGCGGGAGGGC   1150
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU10590___yh   1101 GCTCCGGCTGCTGATTTCCTCTGAACGGCTCGTTCGTGAAGCGGGAGGGC   1150

BSNT_01801___   1151 ACCGAATAATCCCGGTTACGTCCTTTTTGCAACCGAGTTCTTTTGAGTGG   1200
                     ||||||.|||.||||||||||||||||||||.||||||.|||||||||||
BSU10590___yh   1151 ACCGAAGAATTCCGGTTACGTCCTTTTTGCATCCGAGTCCTTTTGAGTGG   1200

BSNT_01801___   1201 GAGGGCGTTTCGCCATCTGAATTGTTGAAAAAAAGCGGATACGAGGGCGA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10590___yh   1201 GAGGGCGTTTCGCCATCTGAATTGTTGAAAAAAAGCGGATACGAGGGCGA   1250

BSNT_01801___   1251 AACAATCGTGCTTTATACCTTTTCGGAAACGGATCATCGTGAGGACGCCG   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10590___yh   1251 AACAATCGTGCTTTATACCTTTTCGGAAACGGATCATCGTGAGGACGCCG   1300

BSNT_01801___   1301 AATGGATTCAAAATATTTGCGCCCAGCACGGTATCAGGCTTACACTTCAA   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10590___yh   1301 AATGGATTCAAAATATTTGCGCCCAGCACGGTATCAGGCTTACACTTCAA   1350

BSNT_01801___   1351 TTCTGTGATGCTGCTGATCTGCGACGGCCGGAAATCGTGCAGATGGCGGA   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10590___yh   1351 TTCTGTGATGCTGCTGATCTGCGACGGCCGGAAATCGTGCAGATGGCGGA   1400

BSNT_01801___   1401 TATCATTCATGACAGTGCGACGTTTTATCAAGACAGCGAGTTTGGTTTTC   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10590___yh   1401 TATCATTCATGACAGTGCGACGTTTTATCAAGACAGCGAGTTTGGTTTTC   1450

BSNT_01801___   1451 TGCATTTGCTGCTGTCGGAGAACAGTTTCTTGTATCAGCATCTATCTGAA   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10590___yh   1451 TGCATTTGCTGCTGTCGGAGAACAGTTTCTTGTATCAGCATCTATCTGAA   1500

BSNT_01801___   1501 AAGCTGACACAGATATACTCAGGAATGACAGAGCAGATGTTTTCCATGCC   1550
                     ||||||||||||||.|.|||||||||||||||||.|||||||||||||||
BSU10590___yh   1501 AAGCTGACACAGATTTGCTCAGGAATGACAGAGCGGATGTTTTCCATGCC   1550

BSNT_01801___   1551 TGACCGCTGTTCGAGAATCGACATCCTGCGTGACATTGACCGGCAGATGA   1600
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU10590___yh   1551 TGACCGCTGTTCGAGAATCAACATCCTGCGTGACATTGACCGGCAGATGA   1600

BSNT_01801___   1601 TACAGGAGCTGAATGCGATCCCGCTGTATCAAAATGTGCTCCAGGTGACA   1650
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU10590___yh   1601 TACAGGAGCTGAACGCGATCCCGCTGTATCAAAATGTGCTCCAGGTGACA   1650

BSNT_01801___   1651 TCAAGTAAAAATGTAAAAGGCCTGGTTCTTGATGAAGAGGGATGGATTGA   1700
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU10590___yh   1651 TCAAGTAAAAATGTAAAAGGCCTGGTGCTTGATGAAGAGGGATGGATTGA   1700

BSNT_01801___   1701 TTTGTACTCCGTATGGCTGTCCAAATAA   1728
                     ||||||||||||||||||||||||||||
BSU10590___yh   1701 TTTGTACTCCGTATGGCTGTCCAAATAA   1728


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