Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01791 and BSU10540

See Amino acid alignment / Visit BSNT_01791 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:57
# Commandline: needle
#    -asequence dna-align/BSNT_01791___yhjK.1.22522.seq
#    -bsequence dna-align/BSU10540___ntdB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01791___yhjK-BSU10540___ntdB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01791___yhjK-BSU10540___ntdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01791___yhjK
# 2: BSU10540___ntdB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 849
# Identity:     839/849 (98.8%)
# Similarity:   839/849 (98.8%)
# Gaps:           0/849 ( 0.0%)
# Score: 4155.0
# 
#
#=======================================

BSNT_01791___      1 ATGTTATTAAGCAAGAAATCGGAGTATAAAACGTTATCCACGGTTGAACA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10540___nt      1 ATGTTATTAAGCAAGAAATCGGAGTATAAAACGTTATCCACGGTTGAACA     50

BSNT_01791___     51 TCCTCAGTATATTGTTTTTTGTGATTTTGATGAAACGTATTTTCCGCATA    100
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU10540___nt     51 TCCTCAATATATTGTTTTTTGTGATTTTGATGAAACGTATTTTCCGCATA    100

BSNT_01791___    101 CAATCGACGAACAAAAGCAACAAGACATTTATGAACTCGAAGACTACCTA    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||.|||
BSU10540___nt    101 CAATCGACGAACAAAAGCAACAAGACATCTATGAACTCGAAGACTATCTA    150

BSNT_01791___    151 GAACAAAAAAGTAAAGATGGGGAACTAATAATCGGATGGGTTACTGGGAG    200
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU10540___nt    151 GAACAAAAAAGTAAAGATGGGGAGCTAATAATCGGATGGGTTACTGGGAG    200

BSNT_01791___    201 CAGTATAGAATCTATTATCGATAAAATGGGACGAGGAAAATTTAGATATT    250
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU10540___nt    201 CAGTATAGAATCTATTCTCGATAAAATGGGACGAGGAAAATTTAGATATT    250

BSNT_01791___    251 TTCCGCATTTTATAGCTAGTGATCTTGGAACTGAAATTACGTACTTTTCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10540___nt    251 TTCCGCATTTTATAGCTAGTGATCTTGGAACTGAAATTACGTACTTTTCA    300

BSNT_01791___    301 GAGCATAACTTCGGTCAGCAAGATAACAAGTGGAACAGTCGCATAAATGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10540___nt    301 GAGCATAACTTCGGTCAGCAAGATAACAAGTGGAACAGTCGCATAAATGA    350

BSNT_01791___    351 AGGGTTTAGTAAAGAAAAGGTTGAAAAACTTGTGAAACAGCTGCATGAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10540___nt    351 AGGGTTTAGTAAAGAAAAGGTTGAAAAACTTGTGAAACAGCTGCATGAAA    400

BSNT_01791___    401 ATCATAACATTCTTTTGAATCCTCAAACTCAATTAGGAAAGTCACGGTAT    450
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU10540___nt    401 ATCATAACATTCTTTTGAATCCTCAAACCCAATTAGGAAAGTCACGGTAT    450

BSNT_01791___    451 AAGCATAACTTCTACTATCAGGAACAAGATGAAATAAACGACAAGAAAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10540___nt    451 AAGCATAACTTCTACTATCAGGAACAAGATGAAATAAACGACAAGAAAAA    500

BSNT_01791___    501 CCTATTAGCAATTGAAAAAATCTGCGAGGAATATGGCGTTTCAGTAAATA    550
                     |||||||||.|||||||||||||||||.|||||.||||||||||||||||
BSU10540___nt    501 CCTATTAGCTATTGAAAAAATCTGCGAAGAATACGGCGTTTCAGTAAATA    550

BSNT_01791___    551 TAAATCGGTGTAATCCCTTAGCAGGCGATCCAGAAGACAGCTATGATGTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10540___nt    551 TAAATCGGTGTAATCCCTTAGCAGGCGATCCAGAAGACAGCTATGATGTA    600

BSNT_01791___    601 GATTTTATCCCCATAGGGACAGGAAAGAATGAAATTGTAACGTTTATGTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10540___nt    601 GATTTTATCCCCATAGGGACAGGAAAGAATGAAATTGTAACGTTTATGTT    650

BSNT_01791___    651 AGAGAAATACAACCTAAATACCGAAAGAGCTATCGCATTTGGGGATAGTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10540___nt    651 AGAGAAATACAACCTAAATACCGAAAGAGCTATCGCATTTGGGGATAGTG    700

BSNT_01791___    701 GAAATGATGTTCGTATGTTACAGACAGTAGGGAATGGATATCTGCTAAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10540___nt    701 GAAATGATGTTCGTATGTTACAGACAGTAGGGAATGGATATCTGCTAAAA    750

BSNT_01791___    751 AATGCAACACAGGAAGCCAAAAACTTGCACAACCATATAACTGATAGTGA    800
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU10540___nt    751 AATGCAACACAGGAAGCCAAAAACTTGCACAACCTTATAACTGATAGTGA    800

BSNT_01791___    801 GTACTCAAAAGGAATTACTAATACCTTAAAAAAATTAATTGGATCATGA    849
                     |||||||||||||||||||||||||||||||||||||||||||||||||
BSU10540___nt    801 GTACTCAAAAGGAATTACTAATACCTTAAAAAAATTAATTGGATCATGA    849


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