Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01772 and BSU10440

See Amino acid alignment / Visit BSNT_01772 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:55
# Commandline: needle
#    -asequence dna-align/BSNT_01772___yhjA.1.22522.seq
#    -bsequence dna-align/BSU10440___yhjA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01772___yhjA-BSU10440___yhjA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01772___yhjA-BSU10440___yhjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01772___yhjA
# 2: BSU10440___yhjA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     260/270 (96.3%)
# Similarity:   260/270 (96.3%)
# Gaps:           0/270 ( 0.0%)
# Score: 1260.0
# 
#
#=======================================

BSNT_01772___      1 ATGAAAAAAGCGGTGGCGGTTTTGCTGTCACTCGGTCTCGTTTTCGGTTT     50
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU10440___yh      1 ATGAAAAAAGCGGCGGCGGTTTTGCTGTCACTCGGTCTCGTTTTCGGTTT     50

BSNT_01772___     51 TTCATACGGAGCTGACCATGTGGCGGAAGCCAAAACAAAGGTGAAGGTCT    100
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU10440___yh     51 TTCATACGGAGCTGGCCATGTGGCGGAAGCCAAAACAAAGGTGAAGGTCT    100

BSNT_01772___    101 ATAAGAACTGCAAGGAGTTAAACAAAGTATACAAAGGCGGAGTGGCCCGC    150
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU10440___yh    101 ATAAGAACTGCAAGGAGCTAAACAAAGTATACAAAGGCGGAGTGGCCCGC    150

BSNT_01772___    151 ACTTCGAAGGCGAAAAACAAAGGCGGAAAAACAAAGTACAAGCCTTACGT    200
                     ||.|||||||.|||||||||||||||||||||.|||||||||||||||||
BSU10440___yh    151 ACATCGAAGGTGAAAAACAAAGGCGGAAAAACGAAGTACAAGCCTTACGT    200

BSNT_01772___    201 CTCTAAGGACCTTTATGATGCCAATAAAAACAAAGACCGCGATAAAGATC    250
                     .|||||||..|||||.||||||||||||||||||||||||||||||||||
BSU10440___yh    201 TTCTAAGGCACTTTACGATGCCAATAAAAACAAAGACCGCGATAAAGATC    250

BSNT_01772___    251 TTATCGCCTGTGAACGGTAA    270
                     ||||||||||||||||||||
BSU10440___yh    251 TTATCGCCTGTGAACGGTAA    270


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