Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01763 and BSU10390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:55
# Commandline: needle
# -asequence dna-align/BSNT_01763.1.22522.seq
# -bsequence dna-align/BSU10390___yhfW.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01763-BSU10390___yhfW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01763-BSU10390___yhfW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01763
# 2: BSU10390___yhfW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1530
# Identity: 646/1530 (42.2%)
# Similarity: 646/1530 (42.2%)
# Gaps: 873/1530 (57.1%)
# Score: 3186.0
#
#
#=======================================
BSNT_01763 0 -------------------------------------------------- 0
BSU10390___yh 1 TTGGCTAATCAACATTTTGCAAAGGAAGCACCTGAAACATACTGGAAAAC 50
BSNT_01763 0 -------------------------------------------------- 0
BSU10390___yh 51 ATCAACTGACCTGCCTTCTTTTCCTGCGCTTCAAGAGGACACTGAATGTG 100
BSNT_01763 0 -------------------------------------------------- 0
BSU10390___yh 101 ACGTCACCATTATCGGAGGCGGGATTACGGGAATCACAACGGCATATGAA 150
BSNT_01763 0 -------------------------------------------------- 0
BSU10390___yh 151 CTTACGAAGAGAGGCTTCCGTGTCGTTTTGATTGAAGCAAATCAGGTTCT 200
BSNT_01763 0 -------------------------------------------------- 0
BSU10390___yh 201 TAACGGAACCACTGCGCATACAACTGCTAAAGTTACCGCACAGCATGACA 250
BSNT_01763 0 -------------------------------------------------- 0
BSU10390___yh 251 TGATATACGACGAATTTATCCGCCATTTCGGATTAAACCATGCGAGGCTT 300
BSNT_01763 1 ---------------------------------------------GTGGA 5
|||||
BSU10390___yh 301 TATTATGAAGCAAACCAAAACGCAATTGATTACATAAAAGGCATTGTGGA 350
BSNT_01763 6 TGAACATCAAATTGAATGCGAATGGATCGAGCAAGACGCATATCTTTATA 55
|||||||||||||||.||.|||||||||||||||||||||||||||||||
BSU10390___yh 351 TGAACATCAAATTGATTGTGAATGGATCGAGCAAGACGCATATCTTTATA 400
BSNT_01763 56 CGGCAAATGAAAACGCTGTTCAAAAAATCCGCACCGAGCATGAGGCATAC 105
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU10390___yh 401 CGGCAAATGAAAACGCTGTTCAAAAAATCCACACCGAGCATGAGGCATAC 450
BSNT_01763 106 ACAAAGCTCGGAATTGAAAGAGACCTTGTCAAGGATCTTCCAATTCCCTT 155
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU10390___yh 451 ACAAAGCTCGGAATTGAAAGAGACCTTATCAAGGATCTTCCAATTCCCTT 500
BSNT_01763 156 AGGTTCTAAGCTGGCGCTTGTCATGAAGAATCAAGCTCAATTTCATCCGC 205
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10390___yh 501 AGGTTCTAAGCTGGCGCTTGTCATGAAGAATCAAGCTCAATTTCATCCGC 550
BSNT_01763 206 TGCAATACTTAAAAGCGCTTCTGGAGCAAATTGTTCAAAAAGGCGGCCGA 255
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU10390___yh 551 TTCAATACTTAAAAGCGCTTCTGGAGCAAATTGTTCAAAAAGGCGGCCGA 600
BSNT_01763 256 ATTTATGAGGAGACCGTTGCGCTTGATATCAAAAAAGGCGAAAGGCCCGA 305
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU10390___yh 601 ATTTATGAAGAGACCGTTGCGCTTGATATCAAAAAAGGCGAAAGGCCCGA 650
BSNT_01763 306 AGTGGTAACTAAAAGCCGGCACGCCATTAAGAGCCGCTTTATCATATGCT 355
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU10390___yh 651 AGTGGTAACAAAAAGCCGGCACGCCATTAAGAGCCGCTTTATCATATGCT 700
BSNT_01763 356 GTTCCCACTTCCCTTTTTATGACGGAGGCGGATTATATGCTGCGAGAATG 405
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10390___yh 701 GTTCCCACTTCCCTTTTTATGACGGAGGCGGATTATATGCTGCGAGAATG 750
BSNT_01763 406 TACTCCGACAGATCTTATGTCCTTGCCATCAAGCCGAAGATCGAGTATCC 455
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10390___yh 751 TACTCCGACAGATCTTATGTCCTTGCCATCAAGCCGAAGATCGAGTATCC 800
BSNT_01763 456 CGAGGGCATGTATTTGAGTATCGATCAGCCGTCAGTGGCGCTCCGCTATA 505
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10390___yh 801 CGAGGGCATGTATTTGAGTATCGATCAGCCGTCAGTGGCGCTCCGCTATA 850
BSNT_01763 506 CGGTTGTAAACGGTGAAAAGCTGATTCTCTTCAGCGGAGTAAGCCATAAA 555
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10390___yh 851 CGGTTGTAAACGGTGAAAAGCTGATTCTCTTCAGCGGAGTAAGCCATAAA 900
BSNT_01763 556 ACAGGGCAGGGAAAAGACATGTCTACACATTATGAAACACTGAGACAACT 605
|||||.||||||||||.|||||||||||||||||||||||||||||||||
BSU10390___yh 901 ACAGGCCAGGGAAAAGCCATGTCTACACATTATGAAACACTGAGACAACT 950
BSNT_01763 606 AGCCGAAAGCACCATCGGCATCGAAAGCATTCCATATTATTGGTCCACCT 655
.||||||||||||||||||||||||||||||||||||||||||||||||.
BSU10390___yh 951 GGCCGAAAGCACCATCGGCATCGAAAGCATTCCATATTATTGGTCCACCC 1000
BSNT_01763 656 AA------------------------------------------------ 657
||
BSU10390___yh 1001 AAGATCTAGTGACGATCGACAAAATCCCGTTTATCGGGCCGATGTCGGAA 1050
BSNT_01763 657 -------------------------------------------------- 657
BSU10390___yh 1051 AATGAGGACAATATTCTAGTAGCGACCGGGTTCAAAAAATGGGGCATGAC 1100
BSNT_01763 657 -------------------------------------------------- 657
BSU10390___yh 1101 GTCCTCAGCAGTCGCAGCCACTTTATTGTCAGACCTTGTGGAGAAAAAAG 1150
BSNT_01763 657 -------------------------------------------------- 657
BSU10390___yh 1151 AAAACCCATACGAAAGCATTTTCACGCCGTCCCGTTTCCATCTGAATCCC 1200
BSNT_01763 657 -------------------------------------------------- 657
BSU10390___yh 1201 GGGTTGCAGAAAGTGATTTCCTACAATGCAGATGTCGCCAAGCATTTGAT 1250
BSNT_01763 657 -------------------------------------------------- 657
BSU10390___yh 1251 AAAAGGAAAGCTTGAAAAGCCTGATGTCCAATTTGAAGACATTTCGCCAG 1300
BSNT_01763 657 -------------------------------------------------- 657
BSU10390___yh 1301 GAGAAGGGAAAGCCGTCACCATAAACGGCAGGCGAGCGGGAGCATTTCGT 1350
BSNT_01763 657 -------------------------------------------------- 657
BSU10390___yh 1351 GATGAGACAGGCTGCCTCCATCTCGTTGATACGACTTGTACCCATTTAGG 1400
BSNT_01763 657 -------------------------------------------------- 657
BSU10390___yh 1401 CTGCGAGGTCGAGTGGAACGACAGTGAGCATACGTGGGATTGTCCGTGCC 1450
BSNT_01763 657 -------------------------------------------------- 657
BSU10390___yh 1451 ACGGATCACGCTTTAAGCCATCTGGCGAAGTTGTAGAGGGTCCGGCCATT 1500
BSNT_01763 657 ------------------------------ 657
BSU10390___yh 1501 AAACCATTAAAACAAATAGATCTCGATTAA 1530
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