Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_01741 and BSU10250

See Amino acid alignment / Visit BSNT_01741 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:52
# Commandline: needle
#    -asequence dna-align/BSNT_01741___yhfJ.1.22522.seq
#    -bsequence dna-align/BSU10250___yhfJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01741___yhfJ-BSU10250___yhfJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01741___yhfJ-BSU10250___yhfJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01741___yhfJ
# 2: BSU10250___yhfJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 996
# Identity:     983/996 (98.7%)
# Similarity:   983/996 (98.7%)
# Gaps:           0/996 ( 0.0%)
# Score: 4863.0
# 
#
#=======================================

BSNT_01741___      1 ATGTTATTTATAGACAATCAAAATATCAATGATCCGCGGATCAATCTTGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10250___yh      1 ATGTTATTTATAGACAATCAAAATATCAATGATCCGCGGATCAATCTTGC     50

BSNT_01741___     51 TATCGAGGAGTACTGTGTAAAGCATTTAGACCCTGAACAGCAATATTTGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10250___yh     51 TATCGAGGAGTACTGTGTAAAGCATTTAGACCCTGAACAGCAATATTTGC    100

BSNT_01741___    101 TCTTTTATGTGAATCAACCGTCTATTATCATTGGAAAAAACCAAAATACA    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU10250___yh    101 TCTTTTATGTGAATCAACCGTCTATTATCATTGGGAAAAACCAAAATACA    150

BSNT_01741___    151 ATAGAAGAAATCAATACAAAATATGTTGAGGAAAACGGGATTATCGTCGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10250___yh    151 ATAGAAGAAATCAATACAAAATATGTTGAGGAAAACGGGATTATCGTCGT    200

BSNT_01741___    201 CCGCCGTTTATCAGGCGGGGGAGCTGTGTACCATGATCTGGGGAACTTGA    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU10250___yh    201 CCGCCGTTTATCAGGCGGGGGCGCTGTGTACCATGATCTGGGGAACTTGA    250

BSNT_01741___    251 ACTTCAGCTTTATTACCAAGGATGACGGGGACAGCTTTCATAACTTTAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10250___yh    251 ACTTCAGCTTTATTACCAAGGATGACGGGGACAGCTTTCATAACTTTAAA    300

BSNT_01741___    301 AAATTCACTGAGCCGGTGATTCAGGCGTTACATCAGCTTGGAGTTGAAGC    350
                     ||||||||||||||.||||||||||||||||||||||||||.||||||||
BSU10250___yh    301 AAATTCACTGAGCCAGTGATTCAGGCGTTACATCAGCTTGGGGTTGAAGC    350

BSNT_01741___    351 CGAATTAAGCGGCCGGAACGACATTGTAGTGGATGGCCGGAAAATATCCG    400
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU10250___yh    351 CGAATTAAGCGGCCGGAACGACATTGTAGTAGATGGCCGGAAAATATCCG    400

BSNT_01741___    401 GAAACGCTCAGTTTGCAACGAAAGGCCGTATTTTCAGCCACGGCACCCTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10250___yh    401 GAAACGCTCAGTTTGCAACGAAAGGCCGTATTTTCAGCCACGGCACCCTC    450

BSNT_01741___    451 ATGTTTGATTCAGCCATTGATCATGTTGTATCAGCATTAAAGGTGAAAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10250___yh    451 ATGTTTGATTCAGCCATTGATCATGTTGTATCAGCATTAAAGGTGAAAAA    500

BSNT_01741___    501 GGATAAAATTGAATCAAAAGGCATCAAATCGATCAGAAGCCGAGTGGCAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10250___yh    501 GGATAAAATTGAATCAAAAGGCATCAAATCGATCAGAAGCCGAGTGGCAA    550

BSNT_01741___    551 ACATCAGTGAGTTTCTCGATGATAAAATGACCACCGAAGAATTCCGCAGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10250___yh    551 ACATCAGTGAGTTTCTCGATGATAAAATGACCACCGAAGAATTCCGCAGC    600

BSNT_01741___    601 CATTTGCTTCGCCATATTTTTAACACGAACGACATTGGAAACGTGCCGGA    650
                     ||||||||||||||||||||||||||.||||||.||||||||||||||||
BSU10250___yh    601 CATTTGCTTCGCCATATTTTTAACACAAACGACGTTGGAAACGTGCCGGA    650

BSNT_01741___    651 GTATAAGCTGACGGAAAAAGATTGGGAGACCATTCATCAAATTTCGAAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10250___yh    651 GTATAAGCTGACGGAAAAAGATTGGGAGACCATTCATCAAATTTCGAAAG    700

BSNT_01741___    701 AGCGCTATCAGAATTGGGATTGGAACTACGGCCGCTCACCGAAATTTAAC    750
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU10250___yh    701 AGCGCTATCAGAATTGGGATTGGAACTACGGCCGCTCACCAAAATTTAAC    750

BSNT_01741___    751 CTTAATCATTCGAAACGTTATCCGGTTGGATCGATCGATTTGCGCCTAGA    800
                     ||||||||||||||.||||||||||||||||||||||||||||.|||.||
BSU10250___yh    751 CTTAATCATTCGAAGCGTTATCCGGTTGGATCGATCGATTTGCACCTGGA    800

BSNT_01741___    801 GGTCAAGAAAGGCAAAATCGAGGACTGCAAAATCTTCGGAGATTTCTTCG    850
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU10250___yh    801 AGTCAAGAAAGGCAAAATCGAGGACTGCAAAATCTTCGGAGATTTCTTCG    850

BSNT_01741___    851 GTGTCGGTGATGTATCTGAAATTGAAAACCTGCTGGTCGGAAAACAATAC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10250___yh    851 GTGTCGGTGATGTATCTGAAATTGAAAACCTGCTGGTCGGAAAACAATAC    900

BSNT_01741___    901 GAACGCAGCGTCATCGCTGATGTGCTCGAAGGTGTGAATCTCAAGCATTA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10250___yh    901 GAACGCAGCGTCATCGCTGATGTGCTCGAAGGTGTGAATCTCAAGCATTA    950

BSNT_01741___    951 CTTTGGGAACATTACGAAAGAGGATTTCCTTGATCTGATTTATTAA    996
                     ||||||||||||||||||||||||||||||||||||||||||.|||
BSU10250___yh    951 CTTTGGGAACATTACGAAAGAGGATTTCCTTGATCTGATTTACTAA    996


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.