Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01709 and BSU10020

See Amino acid alignment / Visit BSNT_01709 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:48
# Commandline: needle
#    -asequence dna-align/BSNT_01709___serC.1.22522.seq
#    -bsequence dna-align/BSU10020___serC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01709___serC-BSU10020___serC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01709___serC-BSU10020___serC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01709___serC
# 2: BSU10020___serC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1080
# Identity:    1067/1080 (98.8%)
# Similarity:  1067/1080 (98.8%)
# Gaps:           0/1080 ( 0.0%)
# Score: 5283.0
# 
#
#=======================================

BSNT_01709___      1 ATGGAACGTACAACGAATTTTAACGCAGGTCCTGCAGCGCTGCCACTGGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se      1 ATGGAACGTACAACGAATTTTAACGCAGGTCCTGCAGCGCTGCCACTGGA     50

BSNT_01709___     51 AGTTCTGCAAAAAGCACAGAAAGAATTTATTGATTTTAACGAATCCGGCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se     51 AGTTCTGCAAAAAGCACAGAAAGAATTTATTGATTTTAACGAATCCGGCA    100

BSNT_01709___    101 TGTCTGTTATGGAGCTTTCCCACCGCAGCAAAGAGTATGAAGCGGTGCAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se    101 TGTCTGTTATGGAGCTTTCCCACCGCAGCAAAGAGTATGAAGCGGTGCAC    150

BSNT_01709___    151 CAAAAAGCGAAAAGCCTCTTAATCGAACTGATGGGCATTCCGGAAGATTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se    151 CAAAAAGCGAAAAGCCTCTTAATCGAACTGATGGGCATTCCGGAAGATTA    200

BSNT_01709___    201 CGATATCTTGTTTCTTCAAGGCGGGGCAAGCCTTCAATTCTCAATGCTTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se    201 CGATATCTTGTTTCTTCAAGGCGGGGCAAGCCTTCAATTCTCAATGCTTC    250

BSNT_01709___    251 CGATGAACTTTTTAACACCTGAAAAAACCGCACATTTTGTGATGACAGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU10020___se    251 CGATGAACTTTTTAACACCTGAAAAAACCGCACATTTTGTGATGACCGGC    300

BSNT_01709___    301 GCTTGGTCTGAAAAAGCACTGGCAGAAACGAAATTGTTCGGGAACACGTC    350
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU10020___se    301 GCTTGGTCTGAAAAAGCACTGGCAGAAACGAAACTGTTCGGGAACACGTC    350

BSNT_01709___    351 TATCACCGCTACTAGTGAAACAGACAATTACAGCTATATTCCAGAGGTTG    400
                     ||||||||||||.||||||||||||||||||||.||||||||||||||||
BSU10020___se    351 TATCACCGCTACAAGTGAAACAGACAATTACAGTTATATTCCAGAGGTTG    400

BSNT_01709___    401 ACCTTACGGATGTAAAAGACGGCGCATATTTACATATCACATCCAACAAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se    401 ACCTTACGGATGTAAAAGACGGCGCATATTTACATATCACATCCAACAAT    450

BSNT_01709___    451 ACAATTTTCGGCACTCAGTGGCAGGAGTTTCCGAATTCTCCTATTCCGCT    500
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU10020___se    451 ACAATTTTCGGCACTCAGTGGCAGGAGTTTCCGAATTCTCCAATTCCGCT    500

BSNT_01709___    501 CGTAGCCGACATGTCCAGCGATATTTTAAGCAGAAAAATCGATGTGTCCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se    501 CGTAGCCGACATGTCCAGCGATATTTTAAGCAGAAAAATCGATGTGTCCA    550

BSNT_01709___    551 AATTTGATGTGATCTACGGAGGCGCCCAAAAGAACCTCGGCCCTTCCGGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se    551 AATTTGATGTGATCTACGGAGGCGCCCAAAAGAACCTCGGCCCTTCCGGC    600

BSNT_01709___    601 GTGACTGTAGTCATTATGAAAAAAAGCTGGCTGAAAAATGAAAATGCGAA    650
                     ||||||||||||||.||||||||||||||||||.||||||||||||||||
BSU10020___se    601 GTGACTGTAGTCATCATGAAAAAAAGCTGGCTGCAAAATGAAAATGCGAA    650

BSNT_01709___    651 CGTCCCAAAAATCCTGAAATATTCCACACATGTCAAAGCGGATTCACTCT    700
                     |||||||||||||.|||||||||||||.||||||||||||||||||||||
BSU10020___se    651 CGTCCCAAAAATCTTGAAATATTCCACGCATGTCAAAGCGGATTCACTCT    700

BSNT_01709___    701 ACAACACTCCGCCGACATTTGCGATTTATATGCTGAGCCTCGTTCTGGAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se    701 ACAACACTCCGCCGACATTTGCGATTTATATGCTGAGCCTCGTTCTGGAA    750

BSNT_01709___    751 TGGCTCAAGGAAAACGGCGGTGTGGAAGCTGTTGAACAGCGCAATGAACA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se    751 TGGCTCAAGGAAAACGGCGGTGTGGAAGCTGTTGAACAGCGCAATGAACA    800

BSNT_01709___    801 AAAAGCGCAGGTTCTCTACAGCTGTATTGATGAAAGCAACGGCTTCTATA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se    801 AAAAGCGCAGGTTCTCTACAGCTGTATTGATGAAAGCAACGGCTTCTATA    850

BSNT_01709___    851 AAGGTCATGCCAGAAAGGACAGCCGCTCACGCATGAATGTCACCTTCACG    900
                     ||||.|||||||||||.||||||||||||||||||||||||||.||||||
BSU10020___se    851 AAGGACATGCCAGAAAAGACAGCCGCTCACGCATGAATGTCACATTCACG    900

BSNT_01709___    901 CTTCGGGATGACGAATTAACGAAAACATTCGTCCAGAAAGCAAAAGATGC    950
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU10020___se    901 CTTCGGGATGACGAATTAACGAAAACATTCGTTCAGAAAGCAAAAGATGC    950

BSNT_01709___    951 GAAGATGATCGGCCTTGGCGGACACCGTTCGGTGGGAGGCTGCCGCGCTT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se    951 GAAGATGATCGGCCTTGGCGGACACCGTTCGGTGGGAGGCTGCCGCGCTT   1000

BSNT_01709___   1001 CTATTTATAACGCGGTCTCTCTCGAAGACTGTGAAAAATTAGCTGCGTTC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se   1001 CTATTTATAACGCGGTCTCTCTCGAAGACTGTGAAAAATTAGCTGCGTTC   1050

BSNT_01709___   1051 ATGAAGAAATTCCAGCAGGAAAATGAGTAA   1080
                     ||||||||||||||||||||||||||||||
BSU10020___se   1051 ATGAAGAAATTCCAGCAGGAAAATGAGTAA   1080


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