Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01709 and BSU10020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:48
# Commandline: needle
# -asequence dna-align/BSNT_01709___serC.1.22522.seq
# -bsequence dna-align/BSU10020___serC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01709___serC-BSU10020___serC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01709___serC-BSU10020___serC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01709___serC
# 2: BSU10020___serC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1080
# Identity: 1067/1080 (98.8%)
# Similarity: 1067/1080 (98.8%)
# Gaps: 0/1080 ( 0.0%)
# Score: 5283.0
#
#
#=======================================
BSNT_01709___ 1 ATGGAACGTACAACGAATTTTAACGCAGGTCCTGCAGCGCTGCCACTGGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se 1 ATGGAACGTACAACGAATTTTAACGCAGGTCCTGCAGCGCTGCCACTGGA 50
BSNT_01709___ 51 AGTTCTGCAAAAAGCACAGAAAGAATTTATTGATTTTAACGAATCCGGCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se 51 AGTTCTGCAAAAAGCACAGAAAGAATTTATTGATTTTAACGAATCCGGCA 100
BSNT_01709___ 101 TGTCTGTTATGGAGCTTTCCCACCGCAGCAAAGAGTATGAAGCGGTGCAC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se 101 TGTCTGTTATGGAGCTTTCCCACCGCAGCAAAGAGTATGAAGCGGTGCAC 150
BSNT_01709___ 151 CAAAAAGCGAAAAGCCTCTTAATCGAACTGATGGGCATTCCGGAAGATTA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se 151 CAAAAAGCGAAAAGCCTCTTAATCGAACTGATGGGCATTCCGGAAGATTA 200
BSNT_01709___ 201 CGATATCTTGTTTCTTCAAGGCGGGGCAAGCCTTCAATTCTCAATGCTTC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se 201 CGATATCTTGTTTCTTCAAGGCGGGGCAAGCCTTCAATTCTCAATGCTTC 250
BSNT_01709___ 251 CGATGAACTTTTTAACACCTGAAAAAACCGCACATTTTGTGATGACAGGC 300
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU10020___se 251 CGATGAACTTTTTAACACCTGAAAAAACCGCACATTTTGTGATGACCGGC 300
BSNT_01709___ 301 GCTTGGTCTGAAAAAGCACTGGCAGAAACGAAATTGTTCGGGAACACGTC 350
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU10020___se 301 GCTTGGTCTGAAAAAGCACTGGCAGAAACGAAACTGTTCGGGAACACGTC 350
BSNT_01709___ 351 TATCACCGCTACTAGTGAAACAGACAATTACAGCTATATTCCAGAGGTTG 400
||||||||||||.||||||||||||||||||||.||||||||||||||||
BSU10020___se 351 TATCACCGCTACAAGTGAAACAGACAATTACAGTTATATTCCAGAGGTTG 400
BSNT_01709___ 401 ACCTTACGGATGTAAAAGACGGCGCATATTTACATATCACATCCAACAAT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se 401 ACCTTACGGATGTAAAAGACGGCGCATATTTACATATCACATCCAACAAT 450
BSNT_01709___ 451 ACAATTTTCGGCACTCAGTGGCAGGAGTTTCCGAATTCTCCTATTCCGCT 500
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU10020___se 451 ACAATTTTCGGCACTCAGTGGCAGGAGTTTCCGAATTCTCCAATTCCGCT 500
BSNT_01709___ 501 CGTAGCCGACATGTCCAGCGATATTTTAAGCAGAAAAATCGATGTGTCCA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se 501 CGTAGCCGACATGTCCAGCGATATTTTAAGCAGAAAAATCGATGTGTCCA 550
BSNT_01709___ 551 AATTTGATGTGATCTACGGAGGCGCCCAAAAGAACCTCGGCCCTTCCGGC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se 551 AATTTGATGTGATCTACGGAGGCGCCCAAAAGAACCTCGGCCCTTCCGGC 600
BSNT_01709___ 601 GTGACTGTAGTCATTATGAAAAAAAGCTGGCTGAAAAATGAAAATGCGAA 650
||||||||||||||.||||||||||||||||||.||||||||||||||||
BSU10020___se 601 GTGACTGTAGTCATCATGAAAAAAAGCTGGCTGCAAAATGAAAATGCGAA 650
BSNT_01709___ 651 CGTCCCAAAAATCCTGAAATATTCCACACATGTCAAAGCGGATTCACTCT 700
|||||||||||||.|||||||||||||.||||||||||||||||||||||
BSU10020___se 651 CGTCCCAAAAATCTTGAAATATTCCACGCATGTCAAAGCGGATTCACTCT 700
BSNT_01709___ 701 ACAACACTCCGCCGACATTTGCGATTTATATGCTGAGCCTCGTTCTGGAA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se 701 ACAACACTCCGCCGACATTTGCGATTTATATGCTGAGCCTCGTTCTGGAA 750
BSNT_01709___ 751 TGGCTCAAGGAAAACGGCGGTGTGGAAGCTGTTGAACAGCGCAATGAACA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se 751 TGGCTCAAGGAAAACGGCGGTGTGGAAGCTGTTGAACAGCGCAATGAACA 800
BSNT_01709___ 801 AAAAGCGCAGGTTCTCTACAGCTGTATTGATGAAAGCAACGGCTTCTATA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se 801 AAAAGCGCAGGTTCTCTACAGCTGTATTGATGAAAGCAACGGCTTCTATA 850
BSNT_01709___ 851 AAGGTCATGCCAGAAAGGACAGCCGCTCACGCATGAATGTCACCTTCACG 900
||||.|||||||||||.||||||||||||||||||||||||||.||||||
BSU10020___se 851 AAGGACATGCCAGAAAAGACAGCCGCTCACGCATGAATGTCACATTCACG 900
BSNT_01709___ 901 CTTCGGGATGACGAATTAACGAAAACATTCGTCCAGAAAGCAAAAGATGC 950
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU10020___se 901 CTTCGGGATGACGAATTAACGAAAACATTCGTTCAGAAAGCAAAAGATGC 950
BSNT_01709___ 951 GAAGATGATCGGCCTTGGCGGACACCGTTCGGTGGGAGGCTGCCGCGCTT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se 951 GAAGATGATCGGCCTTGGCGGACACCGTTCGGTGGGAGGCTGCCGCGCTT 1000
BSNT_01709___ 1001 CTATTTATAACGCGGTCTCTCTCGAAGACTGTGAAAAATTAGCTGCGTTC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU10020___se 1001 CTATTTATAACGCGGTCTCTCTCGAAGACTGTGAAAAATTAGCTGCGTTC 1050
BSNT_01709___ 1051 ATGAAGAAATTCCAGCAGGAAAATGAGTAA 1080
||||||||||||||||||||||||||||||
BSU10020___se 1051 ATGAAGAAATTCCAGCAGGAAAATGAGTAA 1080
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