Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01704 and BSU09990

See Amino acid alignment / Visit BSNT_01704 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:47
# Commandline: needle
#    -asequence dna-align/BSNT_01704___hpr.1.22522.seq
#    -bsequence dna-align/BSU09990___hpr.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01704___hpr-BSU09990___hpr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01704___hpr-BSU09990___hpr.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01704___hpr
# 2: BSU09990___hpr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 612
# Identity:     606/612 (99.0%)
# Similarity:   606/612 (99.0%)
# Gaps:           0/612 ( 0.0%)
# Score: 3006.0
# 
#
#=======================================

BSNT_01704___      1 ATGAATCGAGTGGAACCGCCCTATGATGTGAAAGAAGCTCTAGTCTTCAC     50
                     |||||||||||||||||||||||||||||||||||||||||.||.|||||
BSU09990___hp      1 ATGAATCGAGTGGAACCGCCCTATGATGTGAAAGAAGCTCTGGTTTTCAC     50

BSNT_01704___     51 CCAGAAAATGGCTCAGCTTAGCAAGGCTCTTTGGAAATCGATCGAGAAGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09990___hp     51 CCAGAAAATGGCTCAGCTTAGCAAGGCTCTTTGGAAATCGATCGAGAAGG    100

BSNT_01704___    101 ATTGGCAGCAATGGCTCAAACCGTATGACCTGAATATTAATGAGCATCAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09990___hp    101 ATTGGCAGCAATGGCTCAAACCGTATGACCTGAATATTAATGAGCATCAT    150

BSNT_01704___    151 ATTTTATGGATTGCGTATCAATTGAATGGAGCTTCCATTTCTGAAATCGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09990___hp    151 ATTTTATGGATTGCGTATCAATTGAATGGAGCTTCCATTTCTGAAATCGC    200

BSNT_01704___    201 GAAGTTCGGGGTCATGCACGTATCAACCGCATTCAACTTTTCAAAAAAGC    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU09990___hp    201 GAAATTCGGGGTCATGCACGTATCAACCGCATTCAACTTTTCAAAAAAGC    250

BSNT_01704___    251 TGGAAGAACGGGGATATTTAAGGTTCTCCAAACGGCTGAATGATAAACGG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09990___hp    251 TGGAAGAACGGGGATATTTAAGGTTCTCCAAACGGCTGAATGATAAACGG    300

BSNT_01704___    301 AACACATATGTCCAATTGACTGAGGAAGGTACCGAGGTATTCTGGAGCTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09990___hp    301 AACACATATGTCCAATTGACTGAGGAAGGTACCGAGGTATTCTGGAGCTT    350

BSNT_01704___    351 GCTTGAGGAATTTGATCCGACACGCAACGCTGTTTTTAAAGGGTCACAGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09990___hp    351 GCTTGAGGAATTTGATCCGACACGCAACGCTGTTTTTAAAGGGTCACAGC    400

BSNT_01704___    401 CTTTGTATCATTTATTCGGAAAATTTCCTGAAGTGGCAGAAATGATGTGT    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU09990___hp    401 CTTTATATCATTTATTCGGAAAATTTCCTGAAGTGGCAGAAATGATGTGT    450

BSNT_01704___    451 ATGATACGCCATATCTACGGCGATGATTTTATGGAAATTTTCGAAACGTC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09990___hp    451 ATGATACGCCATATCTACGGCGATGATTTTATGGAAATTTTCGAAACGTC    500

BSNT_01704___    501 ACTCACCAATATTGACAATGACTTTGAAAGCGTAAACGGAAAACTGAAGA    550
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU09990___hp    501 ACTCACCAATATTGACAATGACTTTGAAAGCGTAAACGGAAAATTGAAGA    550

BSNT_01704___    551 AAAAAGCAAAGGACAGTGCGGCGGATGAACCGGCTGAAGAGCTTGAACCT    600
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU09990___hp    551 AAAAAGCAAAGGACAGTGCGGCGGATGAACCGGCTGAAGAGCTCGAACCT    600

BSNT_01704___    601 GTAAACAGTTAA    612
                     ||||||||||||
BSU09990___hp    601 GTAAACAGTTAA    612


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