Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_01689 and BSU09890

See Amino acid alignment / Visit BSNT_01689 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:45
# Commandline: needle
#    -asequence dna-align/BSNT_01689___yhaQ.1.22522.seq
#    -bsequence dna-align/BSU09890___natA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01689___yhaQ-BSU09890___natA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01689___yhaQ-BSU09890___natA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01689___yhaQ
# 2: BSU09890___natA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 897
# Identity:     887/897 (98.9%)
# Similarity:   887/897 (98.9%)
# Gaps:           0/897 ( 0.0%)
# Score: 4395.0
# 
#
#=======================================

BSNT_01689___      1 GTGCTTACAATTGATCACGTAACGAAGACATTTGGAGATTATAAAGCCGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09890___na      1 GTGCTTACAATTGATCACGTAACGAAGACATTTGGAGATTATAAAGCCGT     50

BSNT_01689___     51 TGACGGATTGGACTTAGATATTCCGGAACAGCAAATGTTCGGTTTATTAG    100
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU09890___na     51 TGACGGATTGGACTTAGATATTCCGGAACAGCAAATGTTCGGTCTATTAG    100

BSNT_01689___    101 GCGCAAACGGAGCGGGAAAAACAACGACGTTTCGCATGATCCTAGGATTA    150
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU09890___na    101 GCGCAAACGGAGCGGGAAAAACAACAACGTTTCGCATGATCCTAGGATTA    150

BSNT_01689___    151 TTAAGCATTACGGAGGGCTCAATCAGCTGGAAGGGCCGTCCTGTGAATTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09890___na    151 TTAAGCATTACGGAGGGCTCAATCAGCTGGAAGGGCCGTCCTGTGAATTA    200

BSNT_01689___    201 TCATATCAGCAACAAAATCGGTTATCTGCCGGAAGAGCGGGGCCTTTATC    250
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU09890___na    201 TCATATCAGCAACAAAATCGGTTATTTGCCGGAAGAGCGGGGCCTTTATC    250

BSNT_01689___    251 CGAAAATGAAGGTAAGGGATCAGCTCGTCTATCTTGCCAGATTAAAAGGG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09890___na    251 CGAAAATGAAGGTAAGGGATCAGCTCGTCTATCTTGCCAGATTAAAAGGG    300

BSNT_01689___    301 ATGGAGAAGCGAGAGGCTGTAAAAGAGCTCGGGACATGGCTTGAACGCTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09890___na    301 ATGGAGAAGCGAGAGGCTGTAAAAGAGCTCGGGACATGGCTTGAACGCTT    350

BSNT_01689___    351 CAATATTACAGATTACGAGAATAAGAAGGTGGAAGAGCTTTCGAAGGGGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09890___na    351 CAATATTACAGATTACGAGAATAAGAAGGTGGAAGAGCTTTCGAAGGGGA    400

BSNT_01689___    401 ATCAGCAGAAAATCCAATTCATTTCGGCAGTTTTGCATAAGCCGGAGCTG    450
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU09890___na    401 ATCAGCAGAAAATCCAATTCATTTCGGCAGTTTTGCATAAGCCGGAGCTC    450

BSNT_01689___    451 CTTATTCTTGATGAACCTTTCAGCGGCCTGGACCCTGTCAATGTTGAGCT    500
                     ||.||||||||||||||.|||||||||.||||||||||||||||||||||
BSU09890___na    451 CTGATTCTTGATGAACCATTCAGCGGCTTGGACCCTGTCAATGTTGAGCT    500

BSNT_01689___    501 GCTAAAAGAGGCTGTGATCTCGCTGAAAAACAGCGGCGTTTCTATTTTAT    550
                     ||||||||||||.|||||||||||||||||||||||.|||||||||||||
BSU09890___na    501 GCTAAAAGAGGCCGTGATCTCGCTGAAAAACAGCGGTGTTTCTATTTTAT    550

BSNT_01689___    551 TTTCAAGCCATCGGATGGAACATGTGGAGGAGCTTTGTGAGAACCTTTGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09890___na    551 TTTCAAGCCATCGGATGGAACATGTGGAGGAGCTTTGTGAGAACCTTTGC    600

BSNT_01689___    601 ATATTGCAGAAAGGAAAACCGGTTGTACAAGGCAAGCTGAAGGAGATCAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09890___na    601 ATATTGCAGAAAGGAAAACCGGTTGTACAAGGCAAGCTGAAGGAGATCAA    650

BSNT_01689___    651 GCGTTCTTTCGGTAAAAAGAATGTTACCATTCACTCCGATGACGATCTGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09890___na    651 GCGTTCTTTCGGTAAAAAGAATGTTACCATTCACTCCGATGACGATCTGC    700

BSNT_01689___    701 GCTTTTTGCAGTCCCATGAAGGCATTCTTCAATGGAAGGAAACGGCAGAC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09890___na    701 GCTTTTTGCAGTCCCATGAAGGCATTCTTCAATGGAAGGAAACGGCAGAC    750

BSNT_01689___    751 GGCGTCAAGCTGCAGATTGCCAATGAAGACATTTCTCAAGAGATTTTTGC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09890___na    751 GGCGTCAAGCTGCAGATTGCCAATGAAGACATTTCTCAAGAGATTTTTGC    800

BSNT_01689___    801 TATGCTCCAAGGAAAAGGGTTTATCAGAAAGTTTGAGCTTGAAGAGCCGT    850
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU09890___na    801 GATGCTCCAAGGAAAAGGGTTTATCAGAAAGTTTGAGCTTGAAGAGCCGT    850

BSNT_01689___    851 CACTGCATGATATTTTTATAGAAAAGGTGGGGGCCGTCTATGAATAA    897
                     |||||||||||||||||||||||||||||||||||||||||||||||
BSU09890___na    851 CACTGCATGATATTTTTATAGAAAAGGTGGGGGCCGTCTATGAATAA    897


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.