Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01685 and BSU09870

See Amino acid alignment / Visit BSNT_01685 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:45
# Commandline: needle
#    -asequence dna-align/BSNT_01685___yhaS.1.22522.seq
#    -bsequence dna-align/BSU09870___khtS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01685___yhaS-BSU09870___khtS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01685___yhaS-BSU09870___khtS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01685___yhaS
# 2: BSU09870___khtS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity:     314/339 (92.6%)
# Similarity:   314/339 (92.6%)
# Gaps:          21/339 ( 6.2%)
# Score: 1554.0
# 
#
#=======================================

BSNT_01685___      1 ---------------------ATGGATAAATTGCTGATCAGTTTTCTGTT     29
                                          |||||||||||||||||||||||||||||
BSU09870___kh      1 ATGAGAAGGGAGGAAAGGAACATGGATAAATTGCTGATCAGTTTTCTGTT     50

BSNT_01685___     30 AGGTTTATTTATGGTGTACTTTCCCCCTTCGGACGTGGTTCTGCCTTCCC     79
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU09870___kh     51 AAGTTTATTTATGGTGTACTTTCCCCCTTCGGACGTGGTTCTGCCTTCCC    100

BSNT_01685___     80 AGTTTGAAGCTAGCACTGACAGCTATGTGCCTATGTCCTCATATCCGCAG    129
                     ||||||||||.||||||||||||||||||||||||||.||||||||||||
BSU09870___kh    101 AGTTTGAAGCAAGCACTGACAGCTATGTGCCTATGTCTTCATATCCGCAG    150

BSNT_01685___    130 GAAACACAATCGGCAAAAACGCCATCGCCGGGCAGCATGCACCCGGCTGA    179
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09870___kh    151 GAAACACAATCGGCAAAAACGCCATCGCCGGGCAGCATGCACCCGGCTGA    200

BSNT_01685___    180 GCTGATCAAAGAGTACAGCCCTCTGGCGCAGTCTGTCAGGCAGCTCTCTG    229
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU09870___kh    201 GCTGATCAAAGAGTACAGCCCGCTGGCGCAGTCTGTCAGGCAGCTCTCTG    250

BSNT_01685___    230 TCAAACCACTTGACGAACCGCTGATAAACAGGCTGGAAAAGGCTTTGGCC    279
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09870___kh    251 TCAAACCACTTGACGAACCGCTGATAAACAGGCTGGAAAAGGCTTTGGCC    300

BSNT_01685___    280 GTCCCTGTCAAATACCAGTCTAATTACCTCCGAATATAA    318
                     |||||||||||||||||||||||||||||||||||||||
BSU09870___kh    301 GTCCCTGTCAAATACCAGTCTAATTACCTCCGAATATAA    339


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