Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01684 and BSU09860

See Amino acid alignment / Visit BSNT_01684 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:45
# Commandline: needle
#    -asequence dna-align/BSNT_01684___yhaT.1.22522.seq
#    -bsequence dna-align/BSU09860___khtT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01684___yhaT-BSU09860___khtT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01684___yhaT-BSU09860___khtT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01684___yhaT
# 2: BSU09860___khtT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity:     491/498 (98.6%)
# Similarity:   491/498 (98.6%)
# Gaps:           0/498 ( 0.0%)
# Score: 2427.0
# 
#
#=======================================

BSNT_01684___      1 TTGAATATTAAAGAAAACGATCTGCCGGGCATCGGCAAAAAGTTTGAAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09860___kh      1 TTGAATATTAAAGAAAACGATCTGCCGGGCATCGGCAAAAAGTTTGAAAT     50

BSNT_01684___     51 CGAAACAAGAAGCCACGAAAAAATGACGATTATCATTCATGATGACGGAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09860___kh     51 CGAAACAAGAAGCCACGAAAAAATGACGATTATCATTCATGATGACGGAA    100

BSNT_01684___    101 GAAGGGAAATTTACCGGTTTAATGACCGGGACCCGGATGAGCTTCTTTCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09860___kh    101 GAAGGGAAATTTACCGGTTTAATGACCGGGACCCGGATGAGCTTCTTTCA    150

BSNT_01684___    151 AATATTTCATTGGATGATTCTGAAGCAAGGCAAATTGCAGCTATTCTCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09860___kh    151 AATATTTCATTGGATGATTCTGAAGCAAGGCAAATTGCAGCTATTCTCGG    200

BSNT_01684___    201 GGGCATGGTCTATAAACCGCAAGCTCTGGAGTCCATCGAAATGGCCTTCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09860___kh    201 GGGCATGGTCTATAAACCGCAAGCTCTGGAGTCCATCGAAATGGCCTTCA    250

BSNT_01684___    251 GCGATCTGATTATTGAATGGTTTAAGGTCGAAAAAGGCGCCAAATCGATC    300
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU09860___kh    251 GCGATCTTATTATTGAATGGTTTAAGGTCGAAAAAGGCGCCAAATCGATC    300

BSNT_01684___    301 GGGCGCACACTCGGAGAGCTTGATGTCCGCCAGAATTACGATGTCACTGT    350
                     ||.|||||||||||.|||||||||||.|||||||||||||||||||||||
BSU09860___kh    301 GGACGCACACTCGGTGAGCTTGATGTTCGCCAGAATTACGATGTCACTGT    350

BSNT_01684___    351 GATTGCCATTATCAAACACAACCAGGAAAAGCTCCTAAATCCCGGAGCCG    400
                     .|||||.|||||||||||||||||||||||||||||||||||||||||.|
BSU09860___kh    351 TATTGCGATTATCAAACACAACCAGGAAAAGCTCCTAAATCCCGGAGCGG    400

BSNT_01684___    401 ATTCGATTATTGAAGAAAATGACACCCTTGTCCTCTCAGGTGAGAGAAAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09860___kh    401 ATTCGATTATTGAAGAAAATGACACCCTTGTCCTCTCAGGTGAGAGAAAG    450

BSNT_01684___    451 CATCTGAAGAAACTGATTCACGATTTTCTTTCTGGAGAGGGCGTGTGA    498
                     ||||||||||||||||||||||||||||||||||||||||||||||||
BSU09860___kh    451 CATCTGAAGAAACTGATTCACGATTTTCTTTCTGGAGAGGGCGTGTGA    498


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