Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01681 and BSU09830

See Amino acid alignment / Visit BSNT_01681 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:44
# Commandline: needle
#    -asequence dna-align/BSNT_01681___yhaX.1.22522.seq
#    -bsequence dna-align/BSU09830___yhaX.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01681___yhaX-BSU09830___yhaX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01681___yhaX-BSU09830___yhaX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01681___yhaX
# 2: BSU09830___yhaX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 867
# Identity:     860/867 (99.2%)
# Similarity:   860/867 (99.2%)
# Gaps:           0/867 ( 0.0%)
# Score: 4272.0
# 
#
#=======================================

BSNT_01681___      1 GTGTCAAAACAATTGCTTGCCTTAAATATAGATGGAGCGCTGCTTCGGTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh      1 GTGTCAAAACAATTGCTTGCCTTAAATATAGATGGAGCGCTGCTTCGGTC     50

BSNT_01681___     51 GAACGGGAAGATTCATCAGGCAACGAAAGACGCGATTGAATATGTAAAGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh     51 GAACGGGAAGATTCATCAGGCAACGAAAGACGCGATTGAATATGTAAAGA    100

BSNT_01681___    101 AAAAAGGGATTTACGTCACACTTGTGACCAACCGTCATTTTCGCTCAGCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh    101 AAAAAGGGATTTACGTCACACTTGTGACCAACCGTCATTTTCGCTCAGCA    150

BSNT_01681___    151 CAGAAAATAGCGAAATCGCTAAAGCTTGATGCCAAGCTGATCACCCATAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh    151 CAGAAAATAGCGAAATCGCTAAAGCTTGATGCCAAGCTGATCACCCATAG    200

BSNT_01681___    201 CGGGGCATATATCGCTGAGAAAATTGACGCCCCGTTTTTTGAAAAAAGAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh    201 CGGGGCATATATCGCTGAGAAAATTGACGCCCCGTTTTTTGAAAAAAGAA    250

BSNT_01681___    251 TTTCTGATGATCATACCTTTAACATTGTTCAAGTGCTGGAGAGCTATCAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh    251 TTTCTGATGATCATACCTTTAACATTGTTCAAGTGCTGGAGAGCTATCAA    300

BSNT_01681___    301 TGTAATATTCGGCTTCTTCACGAAAAGTATTCCATCGGAAACAAGAAAAA    350
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh    301 TGCAATATTCGGCTTCTTCACGAAAAGTATTCCATCGGAAACAAGAAAAA    350

BSNT_01681___    351 GGTGAATTCGAATTTATTGGGGAAAGCACTCATTCATCCGTCTGACCCGA    400
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU09830___yh    351 GGTGAATTCGAATTTATTAGGGAAAGCACTCATTCATCCGTCTGACCCGA    400

BSNT_01681___    401 TCTTCTATCCAGTCCAGTTCGTTGAATCATTAAGCGATCTCCTCATGGAT    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh    401 TCTTTTATCCAGTCCAGTTCGTTGAATCATTAAGCGATCTCCTCATGGAT    450

BSNT_01681___    451 GAGCCGGTGAGTGCACCCGTCATCGAGGTGTACACGGAGCACGACATTCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh    451 GAGCCGGTGAGTGCACCCGTCATCGAGGTGTACACGGAGCACGACATTCA    500

BSNT_01681___    501 GCATGACATTACAGAAACGATTACAAAAGCCTTCCCTGCAGTGGATGTGA    550
                     |||||||||||||||||||||||||||||||||||||||.|||||.||||
BSU09830___yh    501 GCATGACATTACAGAAACGATTACAAAAGCCTTCCCTGCGGTGGACGTGA    550

BSNT_01681___    551 TTCGCGTAAACGATGAGAAGCTGAATATCGTCCCGAAAGGTGTCTCGAAG    600
                     |||||||||||||||||||.|||||||||||||||||.||||||||||||
BSU09830___yh    551 TTCGCGTAAACGATGAGAAACTGAATATCGTCCCGAAGGGTGTCTCGAAG    600

BSNT_01681___    601 GAAGCGGGTTTGGCCCTCGTCGCTTCAGAGCTGGGCCTGAGTATGGATGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh    601 GAAGCGGGTTTGGCCCTCGTCGCTTCAGAGCTGGGCCTGAGTATGGATGA    650

BSNT_01681___    651 TGTCGTGGCCATTGGGCATCAGTATGACGATCTGCCGATGATCGAACTTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh    651 TGTCGTGGCCATTGGGCATCAGTATGACGATCTGCCGATGATCGAACTTG    700

BSNT_01681___    701 CCGGTCTTGGGGTAGCGATGGGGAATGCCGTTCCGGAAATTAAGAGAAAG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh    701 CCGGTCTTGGGGTAGCGATGGGGAATGCCGTTCCGGAAATTAAGAGAAAG    750

BSNT_01681___    751 GCAGATTGGGTTACAAGGTCCAATGACGAGCAAGGTGTCGCTTATATGAT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh    751 GCAGATTGGGTTACAAGGTCCAATGACGAGCAAGGTGTCGCTTATATGAT    800

BSNT_01681___    801 GAAGGAATATTTCCGAATGCAGCAGCGAAAAGGATTTCTTGATAAGTTCC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09830___yh    801 GAAGGAATATTTCCGAATGCAGCAGCGAAAAGGATTTCTTGATAAGTTCC    850

BSNT_01681___    851 ACATGAAACGTGTGTAA    867
                     |||||||||||||||||
BSU09830___yh    851 ACATGAAACGTGTGTAA    867


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