Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01674 and BSU09770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:43
# Commandline: needle
# -asequence dna-align/BSNT_01674___yheD.1.22522.seq
# -bsequence dna-align/BSU09770___yheD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01674___yheD-BSU09770___yheD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01674___yheD-BSU09770___yheD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01674___yheD
# 2: BSU09770___yheD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1362
# Identity: 1340/1362 (98.4%)
# Similarity: 1340/1362 (98.4%)
# Gaps: 0/1362 ( 0.0%)
# Score: 6612.0
#
#
#=======================================
BSNT_01674___ 1 GTGAATCCTAAACGGTTTTTGATCGGCATAGACAAAACCAGTGAAAACAC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09770___yh 1 GTGAATCCTAAACGGTTTTTGATCGGCATAGACAAAACCAGTGAAAACAC 50
BSNT_01674___ 51 CCTGTTTCTGCCCTCTTCGCTGAAGCGAGACGGACTTTTGCATGCCGCAT 100
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU09770___yh 51 CCTGTTTCTGCCCTCTTCGCTGAAGCAAGACGGACTTTTGCATGCCGCAT 100
BSNT_01674___ 101 TCGGAACGAAGGTTGTCAGATGCCACGTTGCTTACAGACGGCATCTGGAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09770___yh 101 TCGGAACGAAGGTTGTCAGATGCCACGTTGCTTACAGACGGCATCTGGAA 150
BSNT_01674___ 151 CAAACCGTGCTACTCTCTGAAAATCTGTTTCATGAGCTTTTGCTCCCCCA 200
|||||||||||.||||||||||||||||||||||||||||||||.|||||
BSU09770___yh 151 CAAACCGTGCTTCTCTCTGAAAATCTGTTTCATGAGCTTTTGCTTCCCCA 200
BSNT_01674___ 201 CCGAAGCAGGGCTGATATACTGATTCATGATCATACAGTGCATATCGGGC 250
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU09770___yh 201 CCGAAGCAGGGCAGATATACTGATTCATGATCATACAGTGCATATCGGGC 250
BSNT_01674___ 251 CGTTAGTCGGCATCTTTACGGCAGGGTTTACTGTATCTCTTGAACGTCCA 300
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU09770___yh 251 CGTTAGTCGGCATCTTTACGGCAGGGTTTACTGTATCTCTTGAACGCCCA 300
BSNT_01674___ 301 TTTAAGGATCGTTCCCTCTTTTTTTCTAAACTTGTCACGTTACACGAGCA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09770___yh 301 TTTAAGGATCGTTCCCTCTTTTTTTCTAAACTTGTCACGTTACACGAGCA 350
BSNT_01674___ 351 AGCCGGAGGCTACTGCTTCGTTTTTGGCGCGCACCAAATCAATTGGGAGG 400
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU09770___yh 351 AGCCGGGGGCTACTGCTTCGTTTTTGGCGCGCACCAAATCAATTGGGAGG 400
BSNT_01674___ 401 AAGGCACGATTGAAGGCCTCCTTTACAGGGAAAACGGCTGGGAGAAAAAA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09770___yh 401 AAGGCACGATTGAAGGCCTCCTTTACAGGGAAAACGGCTGGGAGAAAAAA 450
BSNT_01674___ 451 ATCGTTCCATTGCCGAACGTCGTTTATGACCGTTTGCCGAACCGAAAAAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09770___yh 451 ATCGTTCCATTGCCGAACGTCGTTTATGACCGTTTGCCGAACCGAAAAAT 500
BSNT_01674___ 501 TGAAGATTCACTTCTCTTGCAACATACAAAAAAGAGGCTGATCGATGAAT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09770___yh 501 TGAAGATTCACTTCTCTTGCAACATACAAAAAAGAGGCTGATCGATGAAT 550
BSNT_01674___ 551 ATCAGATCCCATGGTTTAATAAAACGTTTTTCAATAAATGGAACGTTCAT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09770___yh 551 ATCAGATCCCATGGTTTAATAAAACGTTTTTCAATAAATGGAACGTTCAT 600
BSNT_01674___ 601 CAATTGCTCGAAAAAGATCCGAGAACGGCACCCTTTTTGCCTAGATCCGA 650
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU09770___yh 601 CAATTGCTCGAAAAAGATCCAAGAACGGCACCCTTTTTGCCTAGATCCGA 650
BSNT_01674___ 651 GCTGACACCGTCTGTGGAGCTGATTGATGAGCTCTGTGGCGCATACAAAA 700
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU09770___yh 651 GCTGACACCGTCTGTGGAGCTGATAGATGAGCTCTGTGGCGCATACAAAA 700
BSNT_01674___ 701 AAGTCTATATCAAACCGGCTAATGGAGCACTCGGCACCGGCATTTATCAG 750
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU09770___yh 701 AAGTCTATATCAAACCGGCAAATGGAGCACTCGGCACCGGCATTTATCAG 750
BSNT_01674___ 751 CTGAAAAGAACAGATGGCGGCCTGACGGTAAAGCATACGAATGACGCCAA 800
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU09770___yh 751 CTGACAAGAACAGATGGCGGCCTGACGGTAAAGCATACGAATGACGCCAA 800
BSNT_01674___ 801 AACATTTACTTCGATTGATTATTCCGATGCCGCCTCATTCCTTGCAGAAT 850
|||.|||||.||.|||||||||||||||||||||||||||||||||||||
BSU09770___yh 801 AACTTTTACATCAATTGATTATTCCGATGCCGCCTCATTCCTTGCAGAAT 850
BSNT_01674___ 851 TTCAAAAACAGCAGAACCCGTCCGACTTTCTCATTCAGCAAGGTGTTGAT 900
||||||||||.||.||||||||||||||||||||||||||||||||||||
BSU09770___yh 851 TTCAAAAACATCACAACCCGTCCGACTTTCTCATTCAGCAAGGTGTTGAT 900
BSNT_01674___ 901 CTCATCGAATTTCAAGGCAAACCAGCGGATTTCCGTGTCCATACCAATAA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09770___yh 901 CTCATCGAATTTCAAGGCAAACCAGCGGATTTCCGTGTCCATACCAATAA 950
BSNT_01674___ 951 AAACAGAAAAGGAAAATGGACAGTGACAGCAATCGCCGTAAAAATTTCCG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09770___yh 951 AAACAGAAAAGGAAAATGGACAGTGACAGCAATCGCCGTAAAAATTTCCG 1000
BSNT_01674___ 1001 GAAAGAACAGCATTACAACACATCTTTCTAACGGCGGCACTGTAAAGACA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09770___yh 1001 GAAAGAACAGCATTACAACACATCTTTCTAACGGCGGCACTGTAAAGACA 1050
BSNT_01674___ 1051 CTTGCGGAAGTGTACGATGATCCCGCTGAAAGAGTTGAGGTCATTAAAAA 1100
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU09770___yh 1051 CTTGCGGAAGTATACGATGATCCCGCTGAAAGAGTTGAGGTCATTAAAAA 1100
BSNT_01674___ 1101 GCTTTCTGCAGCGGCACTGACGGCAAGCCATGTCCTTCATGATCATATCG 1150
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU09770___yh 1101 GCTTTCTGCAGCGGCACTGACTGCAAGCCATGTCCTTCATGATCATATCG 1150
BSNT_01674___ 1151 AGGGGTTTATCGGGGAGATCGGTTTCGATTTTGGCATTGATCAGAACGGT 1200
||||.||||||||||||||.||||||||||||||||||||||||||||||
BSU09770___yh 1151 AGGGATTTATCGGGGAGATTGGTTTCGATTTTGGCATTGATCAGAACGGT 1200
BSNT_01674___ 1201 AAAGTATGGATGTTTGAAGCGAATTCGCGCCCGGGCCGAAGCATTTTTTC 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09770___yh 1201 AAAGTATGGATGTTTGAAGCGAATTCGCGCCCGGGCCGAAGCATTTTTTC 1250
BSNT_01674___ 1251 TCATCCAAATTTGCATCATGTTGATTCTCTTACAAAACGAAGAAGCTTTG 1300
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU09770___yh 1251 TCATCCAAATTTGCATCATGTTGATTCTCTTACAAAACGAAGAAGTTTTG 1300
BSNT_01674___ 1301 AATACGCGTCATATTTATCTGAGAAGGCAATCATATCTCCTGAAGCATTG 1350
|||||||||||||||||||||||||||||||||.||||||.|||||||||
BSU09770___yh 1301 AATACGCGTCATATTTATCTGAGAAGGCAATCACATCTCCGGAAGCATTG 1350
BSNT_01674___ 1351 TGGCCTTCGTAA 1362
||||||||||||
BSU09770___yh 1351 TGGCCTTCGTAA 1362
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