Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01659 and BSU09680

See Amino acid alignment / Visit BSNT_01659 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:41
# Commandline: needle
#    -asequence dna-align/BSNT_01659___nhaC.1.22522.seq
#    -bsequence dna-align/BSU09680___nhaC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01659___nhaC-BSU09680___nhaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01659___nhaC-BSU09680___nhaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01659___nhaC
# 2: BSU09680___nhaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1362
# Identity:    1345/1362 (98.8%)
# Similarity:  1345/1362 (98.8%)
# Gaps:           0/1362 ( 0.0%)
# Score: 6657.0
# 
#
#=======================================

BSNT_01659___      1 TTGGATTCTCAAAAAAAGCTGACGTTTCCGTTAGCCGTCGGTTTATTTAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh      1 TTGGATTCTCAAAAAAAGCTGACGTTTCCGTTAGCCGTCGGTTTATTTAT     50

BSNT_01659___     51 ATTGATGTTATGCATTATTATTTCTTGCTTATTCTTGCTTCATGTAGAAC    100
                     |||.|||||.||||||||||||||||||||||||||||||||||||||||
BSU09680___nh     51 ATTCATGTTGTGCATTATTATTTCTTGCTTATTCTTGCTTCATGTAGAAC    100

BSNT_01659___    101 CTCATATCCCGCTGTTTTTAAGTGTTGTCATGCTTTCAGCAGCAGCTTTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh    101 CTCATATCCCGCTGTTTTTAAGTGTTGTCATGCTTTCAGCAGCAGCTTTA    150

BSNT_01659___    151 TGGTTTGGATTTTCCTGGAAGAGTATTGAAAAAGGGATTGTAGACGGGAT    200
                     ||||||||||||.||||||||||.||||||||||||||||||||||||||
BSU09680___nh    151 TGGTTTGGATTTCCCTGGAAGAGCATTGAAAAAGGGATTGTAGACGGGAT    200

BSNT_01659___    201 CAAAAACGGCGTACAGCCAATTATTGTTCTAGCGCTGATCGGCATCTTAA    250
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU09680___nh    201 CAAAAACGGCGTACAGCCGATTATTGTTCTAGCGCTGATCGGCATCTTAA    250

BSNT_01659___    251 TCGGCGCCTGGATGTACAGCGGCGCAATACCGACTGTGACAGTTTATGCC    300
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU09680___nh    251 TCGGCGCCTGGATGTACAGCGGCGCAATACCGACTATGACAGTTTATGCC    300

BSNT_01659___    301 CTATCCTTTATTGAACCAAGCCACCTTCTGTTGACTGCTTTGTTTTCATG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh    301 CTATCCTTTATTGAACCAAGCCACCTTCTGTTGACTGCTTTGTTTTCATG    350

BSNT_01659___    351 TATGATCATCAGCACACTTGTTGGCTCAAGCCTGACAACTGTAAGCACAA    400
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU09680___nh    351 TATGATCATCAGCACACTTGTTGGCTCAAGTCTGACAACTGTAAGCACAA    400

BSNT_01659___    401 TCGGGGTAGCGCTGATCGGCGTATCGAGCGCGGCTAGCGTTCCGCTTGAA    450
                     ||||.|||||||||||||||||..|||||||||||.||||||||||||||
BSU09680___nh    401 TCGGAGTAGCGCTGATCGGCGTGGCGAGCGCGGCTGGCGTTCCGCTTGAA    450

BSNT_01659___    451 TGGACAGCAGGCGCAGTCATATGCGGCGCTTGTTTTGGGGATAAAATGTC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh    451 TGGACAGCAGGCGCAGTCATATGCGGCGCTTGTTTTGGGGATAAAATGTC    500

BSNT_01659___    501 GCCGATGTCGGACACAACCAACTTTGCAGCCGGAATAGGCGAAATACCGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU09680___nh    501 GCCGATGTCGGACACAACCAACTTTGCAGCCGGAATAGGCGAAATACCAA    550

BSNT_01659___    551 TCTTTGAACACATTCGCCATATGATGGGCACAACCATTCCAGCTTTGCTC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh    551 TCTTTGAACACATTCGCCATATGATGGGCACAACCATTCCAGCTTTGCTC    600

BSNT_01659___    601 ATCACTGTCGTTCTGTTTTACTTTCTCGGTTCATCAGTGTCAGCGGACGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh    601 ATCACTGTCGTTCTGTTTTACTTTCTCGGTTCATCAGTGTCAGCGGACGC    650

BSNT_01659___    651 TGCTTCAACCGAGAATATTCAGCAGGTCATAACCGGAATAAAAGATGCCG    700
                     ||||||||||||.|||||||||||||||||||||||||||||||||||.|
BSU09680___nh    651 TGCTTCAACCGATAATATTCAGCAGGTCATAACCGGAATAAAAGATGCTG    700

BSNT_01659___    701 CAAACGTGACACCGTGGGCCCTTCTTTCTCCGCTCTTAGTCGTTTTGCTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh    701 CAAACGTGACACCGTGGGCCCTTCTTTCTCCGCTCTTAGTCGTTTTGCTG    750

BSNT_01659___    751 GCAATAAAACGGGTATCAGTAATCCCCGTTCTGACTGCCGGAATTATTTC    800
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh    751 GCAATGAAACGGGTATCAGTAATCCCCGTTCTGACTGCCGGAATTATTTC    800

BSNT_01659___    801 CTCGGGAATTTTGACTGCTATTTTTGTACCCGACAGCAGCCTGCAGGCGT    850
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU09680___nh    801 CTCGGGAATTTTGACTGCTATTTTTGTACCCTACAGCAGCCTGCAGGCGT    850

BSNT_01659___    851 TTATGACAGCTTTACAAAATGGCACAACTTTCGAAACTGACAATGAGGCA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh    851 TTATGACAGCTTTACAAAATGGCACAACTTTCGAAACTGACAATGAGGCA    900

BSNT_01659___    901 GCCGCTAAAATTATTAACAGAGGCGGACTGCAATCCATGATGGGCTCTGT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh    901 GCCGCTAAAATTATTAACAGAGGCGGACTGCAATCCATGATGGGCTCTGT    950

BSNT_01659___    951 CTCTCTCATTATGATTGCTTTTGCACTCGGCGGATTGATGGAGAAAATCG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh    951 CTCTCTCATTATGATTGCTTTTGCACTCGGCGGATTGATGGAGAAAATCG   1000

BSNT_01659___   1001 GATTGATTTCTGCACTATTGGAAGGCGTCATGAAAGGCATCCGCTCAAAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh   1001 GATTGATTTCTGCACTATTGGAAGGCGTCATGAAAGGCATCCGCTCAAAA   1050

BSNT_01659___   1051 GGCCGTCTTGTTGCAGCAACTGTCTGCTCAAGCATCGGCGTCAACTTGGC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh   1051 GGCCGTCTTGTTGCAGCAACTGTCTGCTCAAGCATCGGCGTCAACTTGGC   1100

BSNT_01659___   1101 AACGGGCGAACAGTATTTATCGATATTAATACCGGGACAATCATTTAAAT   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh   1101 AACGGGCGAACAGTATTTATCGATATTAATACCGGGACAATCATTTAAAT   1150

BSNT_01659___   1151 CTTTATATGACAAACGAAACATCCAGCGAAAATTTCTGACAAGATCATTA   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh   1151 CTTTATATGACAAACGAAACATCCAGCGAAAATTTCTGACAAGATCATTA   1200

BSNT_01659___   1201 GAGGACGGCGGAACATTAATTAACCCATTGATTCCTTGGGGCGTCAGCGG   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh   1201 GAGGACGGCGGAACATTAATTAACCCATTGATTCCTTGGGGCGTCAGCGG   1250

BSNT_01659___   1251 CGCATTTATGGCGAGCGCACTTGGTGTTCCAGTCATAGACTACATCCCGT   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU09680___nh   1251 CGCATTTATGGCGAGCGCACTTGGTGTTCCAGTCATAGACTACATCCCAT   1300

BSNT_01659___   1301 TTACGTTCTTCCTCTATATATCGCCAATGATCTCCATTTTGATTGGATTT   1350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh   1301 TTACGTTCTTCCTCTATATATCGCCAATGATCTCCATTTTGATTGGATTT   1350

BSNT_01659___   1351 GTTAAAAAATAA   1362
                     ||||||||||||
BSU09680___nh   1351 GTTAAAAAATAA   1362


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