Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01659 and BSU09680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:41
# Commandline: needle
# -asequence dna-align/BSNT_01659___nhaC.1.22522.seq
# -bsequence dna-align/BSU09680___nhaC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01659___nhaC-BSU09680___nhaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01659___nhaC-BSU09680___nhaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01659___nhaC
# 2: BSU09680___nhaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1362
# Identity: 1345/1362 (98.8%)
# Similarity: 1345/1362 (98.8%)
# Gaps: 0/1362 ( 0.0%)
# Score: 6657.0
#
#
#=======================================
BSNT_01659___ 1 TTGGATTCTCAAAAAAAGCTGACGTTTCCGTTAGCCGTCGGTTTATTTAT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 1 TTGGATTCTCAAAAAAAGCTGACGTTTCCGTTAGCCGTCGGTTTATTTAT 50
BSNT_01659___ 51 ATTGATGTTATGCATTATTATTTCTTGCTTATTCTTGCTTCATGTAGAAC 100
|||.|||||.||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 51 ATTCATGTTGTGCATTATTATTTCTTGCTTATTCTTGCTTCATGTAGAAC 100
BSNT_01659___ 101 CTCATATCCCGCTGTTTTTAAGTGTTGTCATGCTTTCAGCAGCAGCTTTA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 101 CTCATATCCCGCTGTTTTTAAGTGTTGTCATGCTTTCAGCAGCAGCTTTA 150
BSNT_01659___ 151 TGGTTTGGATTTTCCTGGAAGAGTATTGAAAAAGGGATTGTAGACGGGAT 200
||||||||||||.||||||||||.||||||||||||||||||||||||||
BSU09680___nh 151 TGGTTTGGATTTCCCTGGAAGAGCATTGAAAAAGGGATTGTAGACGGGAT 200
BSNT_01659___ 201 CAAAAACGGCGTACAGCCAATTATTGTTCTAGCGCTGATCGGCATCTTAA 250
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU09680___nh 201 CAAAAACGGCGTACAGCCGATTATTGTTCTAGCGCTGATCGGCATCTTAA 250
BSNT_01659___ 251 TCGGCGCCTGGATGTACAGCGGCGCAATACCGACTGTGACAGTTTATGCC 300
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU09680___nh 251 TCGGCGCCTGGATGTACAGCGGCGCAATACCGACTATGACAGTTTATGCC 300
BSNT_01659___ 301 CTATCCTTTATTGAACCAAGCCACCTTCTGTTGACTGCTTTGTTTTCATG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 301 CTATCCTTTATTGAACCAAGCCACCTTCTGTTGACTGCTTTGTTTTCATG 350
BSNT_01659___ 351 TATGATCATCAGCACACTTGTTGGCTCAAGCCTGACAACTGTAAGCACAA 400
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU09680___nh 351 TATGATCATCAGCACACTTGTTGGCTCAAGTCTGACAACTGTAAGCACAA 400
BSNT_01659___ 401 TCGGGGTAGCGCTGATCGGCGTATCGAGCGCGGCTAGCGTTCCGCTTGAA 450
||||.|||||||||||||||||..|||||||||||.||||||||||||||
BSU09680___nh 401 TCGGAGTAGCGCTGATCGGCGTGGCGAGCGCGGCTGGCGTTCCGCTTGAA 450
BSNT_01659___ 451 TGGACAGCAGGCGCAGTCATATGCGGCGCTTGTTTTGGGGATAAAATGTC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 451 TGGACAGCAGGCGCAGTCATATGCGGCGCTTGTTTTGGGGATAAAATGTC 500
BSNT_01659___ 501 GCCGATGTCGGACACAACCAACTTTGCAGCCGGAATAGGCGAAATACCGA 550
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU09680___nh 501 GCCGATGTCGGACACAACCAACTTTGCAGCCGGAATAGGCGAAATACCAA 550
BSNT_01659___ 551 TCTTTGAACACATTCGCCATATGATGGGCACAACCATTCCAGCTTTGCTC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 551 TCTTTGAACACATTCGCCATATGATGGGCACAACCATTCCAGCTTTGCTC 600
BSNT_01659___ 601 ATCACTGTCGTTCTGTTTTACTTTCTCGGTTCATCAGTGTCAGCGGACGC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 601 ATCACTGTCGTTCTGTTTTACTTTCTCGGTTCATCAGTGTCAGCGGACGC 650
BSNT_01659___ 651 TGCTTCAACCGAGAATATTCAGCAGGTCATAACCGGAATAAAAGATGCCG 700
||||||||||||.|||||||||||||||||||||||||||||||||||.|
BSU09680___nh 651 TGCTTCAACCGATAATATTCAGCAGGTCATAACCGGAATAAAAGATGCTG 700
BSNT_01659___ 701 CAAACGTGACACCGTGGGCCCTTCTTTCTCCGCTCTTAGTCGTTTTGCTG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 701 CAAACGTGACACCGTGGGCCCTTCTTTCTCCGCTCTTAGTCGTTTTGCTG 750
BSNT_01659___ 751 GCAATAAAACGGGTATCAGTAATCCCCGTTCTGACTGCCGGAATTATTTC 800
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 751 GCAATGAAACGGGTATCAGTAATCCCCGTTCTGACTGCCGGAATTATTTC 800
BSNT_01659___ 801 CTCGGGAATTTTGACTGCTATTTTTGTACCCGACAGCAGCCTGCAGGCGT 850
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU09680___nh 801 CTCGGGAATTTTGACTGCTATTTTTGTACCCTACAGCAGCCTGCAGGCGT 850
BSNT_01659___ 851 TTATGACAGCTTTACAAAATGGCACAACTTTCGAAACTGACAATGAGGCA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 851 TTATGACAGCTTTACAAAATGGCACAACTTTCGAAACTGACAATGAGGCA 900
BSNT_01659___ 901 GCCGCTAAAATTATTAACAGAGGCGGACTGCAATCCATGATGGGCTCTGT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 901 GCCGCTAAAATTATTAACAGAGGCGGACTGCAATCCATGATGGGCTCTGT 950
BSNT_01659___ 951 CTCTCTCATTATGATTGCTTTTGCACTCGGCGGATTGATGGAGAAAATCG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 951 CTCTCTCATTATGATTGCTTTTGCACTCGGCGGATTGATGGAGAAAATCG 1000
BSNT_01659___ 1001 GATTGATTTCTGCACTATTGGAAGGCGTCATGAAAGGCATCCGCTCAAAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 1001 GATTGATTTCTGCACTATTGGAAGGCGTCATGAAAGGCATCCGCTCAAAA 1050
BSNT_01659___ 1051 GGCCGTCTTGTTGCAGCAACTGTCTGCTCAAGCATCGGCGTCAACTTGGC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 1051 GGCCGTCTTGTTGCAGCAACTGTCTGCTCAAGCATCGGCGTCAACTTGGC 1100
BSNT_01659___ 1101 AACGGGCGAACAGTATTTATCGATATTAATACCGGGACAATCATTTAAAT 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 1101 AACGGGCGAACAGTATTTATCGATATTAATACCGGGACAATCATTTAAAT 1150
BSNT_01659___ 1151 CTTTATATGACAAACGAAACATCCAGCGAAAATTTCTGACAAGATCATTA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 1151 CTTTATATGACAAACGAAACATCCAGCGAAAATTTCTGACAAGATCATTA 1200
BSNT_01659___ 1201 GAGGACGGCGGAACATTAATTAACCCATTGATTCCTTGGGGCGTCAGCGG 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 1201 GAGGACGGCGGAACATTAATTAACCCATTGATTCCTTGGGGCGTCAGCGG 1250
BSNT_01659___ 1251 CGCATTTATGGCGAGCGCACTTGGTGTTCCAGTCATAGACTACATCCCGT 1300
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU09680___nh 1251 CGCATTTATGGCGAGCGCACTTGGTGTTCCAGTCATAGACTACATCCCAT 1300
BSNT_01659___ 1301 TTACGTTCTTCCTCTATATATCGCCAATGATCTCCATTTTGATTGGATTT 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09680___nh 1301 TTACGTTCTTCCTCTATATATCGCCAATGATCTCCATTTTGATTGGATTT 1350
BSNT_01659___ 1351 GTTAAAAAATAA 1362
||||||||||||
BSU09680___nh 1351 GTTAAAAAATAA 1362
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