Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01638 and BSU09520

See Amino acid alignment / Visit BSNT_01638 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:39
# Commandline: needle
#    -asequence dna-align/BSNT_01638___sigM.1.22522.seq
#    -bsequence dna-align/BSU09520___sigM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01638___sigM-BSU09520___sigM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01638___sigM-BSU09520___sigM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01638___sigM
# 2: BSU09520___sigM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 492
# Identity:     491/492 (99.8%)
# Similarity:   491/492 (99.8%)
# Gaps:           0/492 ( 0.0%)
# Score: 2451.0
# 
#
#=======================================

BSNT_01638___      1 GTGACGATCGATGAAATTTACCAAATGTACATGAATGATGTTTACAGGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09520___si      1 GTGACGATCGATGAAATTTACCAAATGTACATGAATGATGTTTACAGGTT     50

BSNT_01638___     51 CCTGCTCTCCATGACAAAAGACAAGCATCTTGCTGAAGACTTGCTGCAGG    100
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU09520___si     51 CCTGCTCTCCATGACAAAAGACAAGCATCTTGCTGAAGACTTACTGCAGG    100

BSNT_01638___    101 AAACCTTTATGCGGGCATACATACACATTCACTCCTATGATCACAGCAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09520___si    101 AAACCTTTATGCGGGCATACATACACATTCACTCCTATGATCACAGCAAA    150

BSNT_01638___    151 GTAAAGCCCTGGCTTTTTCAAGTGGCGCGAAACGCCTTCATTGATTACGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09520___si    151 GTAAAGCCCTGGCTTTTTCAAGTGGCGCGAAACGCCTTCATTGATTACGT    200

BSNT_01638___    201 CAGAAAGCATAAGAAAGAAGTAACCATTTCTGATGACTTAATCGGAAGCC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09520___si    201 CAGAAAGCATAAGAAAGAAGTAACCATTTCTGATGACTTAATCGGAAGCC    250

BSNT_01638___    251 TCTTTCAAAATGCTGTTCAAAGTCCTGCCCATCAGGTAGAGATAAAGGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09520___si    251 TCTTTCAAAATGCTGTTCAAAGTCCTGCCCATCAGGTAGAGATAAAGGAA    300

BSNT_01638___    301 GTGCTGACTGGTTATATGTCCGAGCTCCCCGATAATTATCGGGAGGCCTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09520___si    301 GTGCTGACTGGTTATATGTCCGAGCTCCCCGATAATTATCGGGAGGCCTT    350

BSNT_01638___    351 AACGCTATATTATTTAAAAGAGTTAAACTACAAAGAAGCATCCCATATTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09520___si    351 AACGCTATATTATTTAAAAGAGTTAAACTACAAAGAAGCATCCCATATTA    400

BSNT_01638___    401 TGAATATTTCAGAGGCGAATTTTAAAAGTGTTTTATTTCGTGCCAGACAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09520___si    401 TGAATATTTCAGAGGCGAATTTTAAAAGTGTTTTATTTCGTGCCAGACAG    450

BSNT_01638___    451 CGGCTGAAAGCACTTTATAATAGAGGTGTTAATGATGAATGA    492
                     ||||||||||||||||||||||||||||||||||||||||||
BSU09520___si    451 CGGCTGAAAGCACTTTATAATAGAGGTGTTAATGATGAATGA    492


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