Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_01634 and BSU09490

See Amino acid alignment / Visit BSNT_01634 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:39
# Commandline: needle
#    -asequence dna-align/BSNT_01634___yhdJ.1.22522.seq
#    -bsequence dna-align/BSU09490___yhdJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01634___yhdJ-BSU09490___yhdJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01634___yhdJ-BSU09490___yhdJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01634___yhdJ
# 2: BSU09490___yhdJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity:     428/465 (92.0%)
# Similarity:   428/465 (92.0%)
# Gaps:          36/465 ( 7.7%)
# Score: 2136.0
# 
#
#=======================================

BSNT_01634___      1 ATGATCATTGTAACGAAAGGAAAGGGGATTGAGAAGATGATCCATATGAA     50
                                                         ||||||||||||||
BSU09490___yh      1 ------------------------------------ATGATCCATATGAA     14

BSNT_01634___     51 ACAATTAACCTCGAAAGAAGAATGGGCTGAGTCGTATCCGATTATGAGTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09490___yh     15 ACAATTAACCTCGAAAGAAGAATGGGCTGAGTCGTATCCGATTATGAGTG     64

BSNT_01634___    101 AATTGAGAACAGAACTGGATATAGAGACGTATTTACAAAGGCTTGAAGCC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09490___yh     65 AATTGAGAACAGAACTGGATATAGAGACGTATTTACAAAGGCTTGAAGCC    114

BSNT_01634___    151 TGTGTGCAGAAAGAATCGTATATGCTGTTTGCCTTATATGAAAATACAGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09490___yh    115 TGTGTGCAGAAAGAATCGTATATGCTGTTTGCCTTATATGAAAATACAGC    164

BSNT_01634___    201 AATCAGAGCGCTGTGCGGGGCTCTGCCGAGAGTTTCCATTCATAAAGGAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09490___yh    165 AATCAGAGCGCTGTGCGGGGCTCTGCCGAGAGTTTCCATTCATAAAGGAG    214

BSNT_01634___    251 AGCACTTGTGGATTGCGGATCTTGTTACAACGGCACCTTGCCGATCAAAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09490___yh    215 AGCACTTGTGGATTGCGGATCTTGTTACAACGGCACCTTGCCGATCAAAG    264

BSNT_01634___    301 GGATACGGCAAAATGCTTTTGGATTATGCCTCAGACTGGGCGAGAAAAGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09490___yh    265 GGATACGGCAAAATGCTTTTGGATTATGCCTCAGACTGGGCGAGAAAAGC    314

BSNT_01634___    351 CGGACTCGGTTTTGTCAGTCTTTCATCTGGCCTGCAGCGTAAAGACGCAC    400
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU09490___yh    315 CGGACTCGGTTTTGTCAGTCTTTCATCTGGCCTTCAGCGTAAAGACGCAC    364

BSNT_01634___    401 ATCGATTTTATACAGATAAAATGGGTTTTACTATAGAAAGTTATTTGTTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09490___yh    365 ATCGATTTTATACAGATAAAATGGGTTTTACTATAGAAAGTTATTTGTTC    414

BSNT_01634___    451 CGAAAACCGGTATAA    465
                     |||||||||||||||
BSU09490___yh    415 CGAAAACCGGTATAA    429


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.